Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1095 ATGCGTTGGTCTTCCTTCTATCAAACAGCCTCGAGGGTTTTTCATGAGAATCCGTCTTGGTCCAAGTCTGTTGTTGTATGCACTGTCATCAGTGGAGGTCTAGTGGCATATTGTGATGCTAGACCAGACTATGGTGTTGATCAAAGTGCAAAAAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCTGCAACCAGTTTTTTGAAAAATATGAAAAGCTCCTCCTATGATATTCATGTGGTTTCACCACGCAACTATTTTGCATTCACTCCTTTGCTACCAAGTGTCACTTGTGGCACAGTGGAAGCACGGAGCATTGTTGAACCGATTCGCAGTATTTCCCAAAAGAATTCTGTTCAACAGAGTGGTGTAAATATTCAATTCAGTGAAGCTGAATGCTATAAGATCGATCCCAAAAACAATAAAGTTTACTGCAAATCTGCTAATGACAAACAGCTGGGTGCCCCAGAAGAATTTTCTGTTGATTATGATTACCTGGTAATAGCTATGGGAGCCCGTTCCAATACCTTTAACACACCCGGTGTTCAGGAGCATGCCCATTTCTTAAAGGAAGTGGATGATGCTCTAAGAATCCGTCGAAAGGTGGTTGACCTTTTTGAAAGAGCAAGCCTCCCTTCGTTACCAGTGGAAGAGAAGAAAAAGCTTCTCAGTTTTGTAGTTGTTGGTGGTGGCCCAACTGGGGTGGAGTTTTCAGCTGAACTTTATGATTTCGTACACGAGGATATTGCTAGATTATATCCTTCTCTTAAAAAATATGTGAAGATAACTCTTCTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAGTTTGCTGAAGAAAAGTTCTCCAGAGATGGCATTGATGTGAGGTTGGGATCTATGGTTGTCAAAGTTAGTGAAGATGAAATCTCTGCCAAAGAAAGGGGAAGTGGTAAAGTTGTTTCTATACCTCATGGAATGGTAGTTTGGTCAACAGGTATCGGTGCTCGCCCTGAAATGCTTGAATTTATGAAGCAGCTTGGCCAGATTAACAGGCGTGCAGTGGTCACTGACGAATGGCTAAGGGTGGAAGGATGTGACAACATCTATGCTCTAGGTGATTGTGCCACTATAAATCAACGTAAAGTTATGGAAGATATAGCAGTGATATTTAGCAAGGCAGACAAGGGCAATTCAGGAAGGTTAGATCTTAAAGAATTTCAAGACGTTGTTGGTGACATTATTGAGAGGTACCCACAAGTGGATATTTATCTGAAGAAGAACCAAATGAAAGATTTGGCCAGCTTGCTAAAGAAGACTGAAGAAAGCTCTCTTACGGTGGACATTGAATACTTCAAAGATGCTCTTTCCAAAGTAGATTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTGCTCAACAAGGAGCCTATCTTGCTGACTGTTTCAACCGCATGGAGTTGTGTGAGACGTATCCTGAAGGCCCTCTCAGGTTCAGGGGAACTGGACGCCATAGGTTTCGTCCCTTCAGGTACAAGCATTTTGGACAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAGCTTCCAGGTGATTGGATTTCAATTGGTCATAGCACCCAGTGGCTCTGGTATTCGGTATATACGAGTAAACTAGTAAGCTGGAGAACAAGGACTTTGGTGGTATCTGACTGGGCAAGGCGATTCGTATTTGGAAGGGACTCAAGTCGAATCTAA 1734 0.4291 MRWSSFYQTASRVFHENPSWSKSVVVCTVISGGLVAYCDARPDYGVDQSAKKKVVVLGTGWAATSFLKNMKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRSISQKNSVQQSGVNIQFSEAECYKIDPKNNKVYCKSANDKQLGAPEEFSVDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVDDALRIRRKVVDLFERASLPSLPVEEKKKLLSFVVVGGGPTGVEFSAELYDFVHEDIARLYPSLKKYVKITLLEAGDHILNMFDKRITEFAEEKFSRDGIDVRLGSMVVKVSEDEISAKERGSGKVVSIPHGMVVWSTGIGARPEMLEFMKQLGQINRRAVVTDEWLRVEGCDNIYALGDCATINQRKVMEDIAVIFSKADKGNSGRLDLKEFQDVVGDIIERYPQVDIYLKKNQMKDLASLLKKTEESSLTVDIEYFKDALSKVDSQMKNLPATAQVAAQQGAYLADCFNRMELCETYPEGPLRFRGTGRHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSVYTSKLVSWRTRTLVVSDWARRFVFGRDSSRI* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1095 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Apr3g1095 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Apr3g1095 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 351 373 - -
Apr3g1095 577 PANTHER NAD(P)H DEHYDROGENASE B2 70 577 - -
Apr3g1095 577 SUPERFAMILY FAD/NAD(P)-binding domain 216 376 IPR036188 -
Apr3g1095 577 SUPERFAMILY FAD/NAD(P)-binding domain 51 275 IPR036188 -
Apr3g1095 577 SUPERFAMILY EF-hand 373 463 IPR011992 -
Apr3g1095 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 381 IPR023753 GO:0016491
Apr3g1095 577 Gene3D - 44 398 - -
Apr3g1095 577 Gene3D - 423 576 - -
Apr3g1095 577 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Apr3g1095 577 PANTHER NADH DEHYDROGENASE 70 577 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1095 Apr-Chr3 25560563 25564975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1095 1 577 Chloroplast and Mitochondria Gene Families AT4G21490 66.894 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1095 K03885 - gmx:100820044 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1095 3 25560563 25564975 Apr3g1095 3 25560563 25564975 ECH