Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1094 ATGACCATTGATTCCTTCTTCATCAGGGCCTCAAGGGTTCTCAGCACCTCCAATCTTGTGCTTCTCTGCACTCTCAGTGGTGGTGGTGGTGTGGTGGCATACTCGGAAATACAATCAGGAGCTGAACCTCCTAGGATTGATGCTAATGAGCCCCGCAAAAAGAAAGTGTTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGATCTGGATGCTTCATTATATGATGTTCAGGTTGTTTCGCCTCGGAACTACTTTGCATTTACTCCCTTACTACCCAGTGTAACTTGTGGGACAGTTGAAGCGCGGAGCATTGTTGAGCCAGTCCGAAACATTATTAAAAAGAGAAAAGGAGAAATAAATTTTTGGGAGGCAGAATGTGTCAAGATTGATGCTGCGACCAAAAAGGTTTTTTGTCAGTCCAATATTGAGAACTTAGTGGGAAGTGGCGAATTTTCTTTGGACTACGACTTCTTGGTAGTAGCAGTAGGAGCACAAGTAAATACTTTTAACACCCCCGGCGTCAAGGAGAACTGTCATTTTCTGAAGGATGTTGAGGATGCTCAGAAGATCAGACTGTCAGTGATTGATTGCTTTGAGAAAGCTGTTCTTCCTAGTCTATCTGAAGAAGAGCAAAGGTCAAATCTTCATTTTGTAGTTGTTGGAGGAGGTCCAACTGGTGTGGAATTTGCTGCAGAGCTGCATGATTATGTCCAAGAAGATTTAATCAAACTATATCCAACTGTTAAAAAAAAAGTGAAAATAACATTGATTCAATCCGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGAATAAATTTACAAGAGATGGGATAGAAGTTCAAACAGGATGCCGGGTTGTCAGTGTTAATGACAAGGAAATTACAATGAAGGTGAAATCAACAGGAGAGATATGCTCTGTTCCCCATGGGTTGGTTGTCTGGTCCACTGGTATTGCAACTATTCCAGTTATAAGGGACTTTATGGAACAAATTGGTCAGGCTAAAAGGCATGTACTAGCAACTGATGAATGGTTACGTGTGAAGGGATGCGAAGATGTGTATGCTATTGGAGATTGCTCTACAATAAATCAACGTAAAATCATGGATGATATCACAGCCGTATTTGAAGCTGTAGACAAAAATAAGTCTGGGACCTTAACTGTTGAGGAATTCCAGGATGTGATGGATGACATCGTCTTAAGATATCCGCAAGTTGAACACTATCTAAAGCGGAAACATCTGCGTGATTTTTCGACTCTGTGGAAAGATTTACAAGGGAATGATTGCAAAGAAATAGACATAGAAGCGTTTAAATTGGCCCTTTCTCATGCAGATTCTCAAATGAAGAGTCTGCCAGCAACCGCACAGGTTGCTGCTCAACAGGGTGCATATCTAGCTAGGTGCTTTAACCGCATGGATCATGCTGTAGAGAATCCTGAAGGTCCTCGACGATTTAGAGGATCTGGACGACATAAGTTTCTTCCCTTCCGGTATAAGCATTTTGGGCAATTTGCTCCACTTGGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTGTATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTTCTTGGTCATATCTGATTGGACTAGAAGATTCATATTTGGCAGGGATTCAAGTCGAGTTTAA 1725 0.4243 MTIDSFFIRASRVLSTSNLVLLCTLSGGGGVVAYSEIQSGAEPPRIDANEPRKKKVLVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEINFWEAECVKIDAATKKVFCQSNIENLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSLSEEEQRSNLHFVVVGGGPTGVEFAAELHDYVQEDLIKLYPTVKKKVKITLIQSGDHILNMFDERISSFAENKFTRDGIEVQTGCRVVSVNDKEITMKVKSTGEICSVPHGLVVWSTGIATIPVIRDFMEQIGQAKRHVLATDEWLRVKGCEDVYAIGDCSTINQRKIMDDITAVFEAVDKNKSGTLTVEEFQDVMDDIVLRYPQVEHYLKRKHLRDFSTLWKDLQGNDCKEIDIEAFKLALSHADSQMKSLPATAQVAAQQGAYLARCFNRMDHAVENPEGPRRFRGSGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRFLVISDWTRRFIFGRDSSRV* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1094 574 SMART efh_1 379 407 IPR002048 GO:0005509
Apr3g1094 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 54 380 IPR023753 GO:0016491
Apr3g1094 574 SUPERFAMILY EF-hand 342 460 IPR011992 -
Apr3g1094 574 PANTHER NADH DEHYDROGENASE 50 574 IPR045024 GO:0003954|GO:0006116
Apr3g1094 574 Gene3D - 444 574 - -
Apr3g1094 574 Gene3D - 44 429 - -
Apr3g1094 574 SUPERFAMILY FAD/NAD(P)-binding domain 53 271 IPR036188 -
Apr3g1094 574 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Apr3g1094 574 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 50 574 - -
Apr3g1094 574 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Apr3g1094 574 SUPERFAMILY FAD/NAD(P)-binding domain 219 373 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1094 Apr-Chr3 25551249 25557266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1094 5 574 Chloroplast and Mitochondria Gene Families AT4G21490 63.385 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1094 K03885 - gmx:100793566 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1094 3 25551249 25557266 Apr3g1094 3 25551249 25557266 ECH