Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1092 ATGGAGGATTCACTCAAGGATGATGGGCTAGTTTTATCACTCCAATATTCACAATCAGCAAATAATCATAGGGAACCTAAATTTCAGAAATTTACACCTGAGAGTCAGAACCATTCAATTTCTATTCCTCTGAGACACTGTAATTCTATATTGAATGAAAGAAGAACACTTACAGAGGCAAGTGGCAACGTTAATTGGGAAATTTATAGCCATTTTCAGCAAAATCAAGGTGCAAGTAGGAGGGAAAGCTTGGAGAAATTTCCTTCAGTAAATGGAGGTTCTGTGGAAATTGATTCTTATTCTACAACTTGCCCAAGATATGATCACACAAAAAATGAGGCAAACAAGTCAAAATTTTCACATGTACTTACTCAGCTCCATAAAGTTCATAAAGGCTTGGTTACAAAATCATCATCATGTTTACATATTCCTGGAGTCATCAGCCCTCATGCCAAAGCCGTGCAGCAGTGGAACAGAGTTTTTGTCAGTGCTTGTCTGGTGGCAGTTTTCGTAGACCCTTTATTTTTCTTCTTGCTATCAGCAATCAAGGAATTGAAATGCATTGTTATTGAACCGGCCAATAGTCCCATTACAATTGCAATTGTAATTTTTAGAAGCCTGACCGATTTTATATACCTCTTGCATATTCTTCTCCAGTTTAGGTTGGCTTATGTGGCCCCGGAATCTAGAGTGGTTGGTGCAGGAGAGGTGGTCGAACATCCAAAAAAAATTGCACTCAATTACCTTAGGGGCTATCTTGTCATTGACATATTTAATGTAATGCCAGTTCCTCAGGTGAGTATTATATTATTTATGCTACCAAAATTCTTTGGATCTTCTGGAGCTCAAGCTAATACTGAAAAAAATATTTTACGGGTTTCTATTCTTCTTCAAAACCTTCCCAGATTGTGTAGGTTTCTTACTCTGCTTGCTAGGCAGACTCCAAGTGGCTTCATTTTTGAGTCAGCATGGGAAAATTTCATTATAAATCTTCTCATTTTCATGTTGTCTGCCCATGTTGTGGGTTCATGTTGGTATCTCTTTGGATTACAGAGAGTTAACCAATGCCTTCGAGATGCCTGCCACAGCTCCAACATAGAGTCATGCATGAGGTTTATTGATTGTGGGAATGGGAATTCTGTAGACGTTTTCCTTGATCCAACGTGGAGTAGCTGGATAAATGATACGAGTTCTAGTGCTTGTTTTCAAAAAGATGGTGGTTTCAATTATGGAATCTATGCTGAAGCAGTTGGCCTTATTGCTATAAATGATAGTGTGTTTATTCAAAAATATGTTTATTCATTGTTCTGGGGGTTCCAGCAAATCAGCACTCTAGCTGGAAATCTAACTCCAAGCTACTTCGTTTGGGAGGTTCTTTTCACCATGGCTATTGTTGGGCTAGGCCTATTGCTCTTTGCCCTCCTCATAGGAAATATGCAGAACTTTCTTCAGGCTCTTGGACAGAGGAGATTGGAAATGTCATTGAGACAACGAGATTATGATCGATGGATGAGCCATCGATGCTTGCCGGAAGAACTAAGAAGGCAAGTAAGAAGCGCTGAACGGTATAACTGGGTTGCCAGCAGAGGGGTAAATGAAGAAAAGCTTTTGGAGAATCTGCCTGAAGAACTTCAAAGAGATATAAGACGTCATCTCTTCAAATTTGTGAAGAAGGTTAGGATTTTTTCCATTATGGATGATCAATTAATAGATGCAATTTGTGAAAGGCTAAAGCTGAAGATATTCATTGAAGAAAGCAAAATTCTATATCCTGGTGGTGCAATTGAGAAGATTATTTTTATCATACGTGGAAAAGTGGAGAGCATAGAAGACAAAACTATAGTTTCCTTATCCGAGGGAGATGTTTGTGGCGAGGAACTTCTCACATGGTGCCTCGAACATTATTCAGTAAACAAAAATGGGAGAAAAGTAAAGATTAGTGGACAGAGGGTACTTAGCAACAGAACAGTTAGATGCTTAACGAATGTAGAAGCGTTTGTGCTGCAAGTTTCAGATCTTGAAGAGGTCACTAGTCTTTATGCAAGATTTTTGCGGAATCAACGTGTTCTTGGAGCTATCAGGTATGAATCACCTTACTGGAGAGCTTTTGCAGCAAAATGCATTCAAGTAACTTGGAGATACCATAGGAGGCGCCGAACGCGTTACGCGGGAACATGCTCATACCCCCCTCAATCTAACCATTCATTAATAAATAGTTAA 2220 0.3923 MEDSLKDDGLVLSLQYSQSANNHREPKFQKFTPESQNHSISIPLRHCNSILNERRTLTEASGNVNWEIYSHFQQNQGASRRESLEKFPSVNGGSVEIDSYSTTCPRYDHTKNEANKSKFSHVLTQLHKVHKGLVTKSSSCLHIPGVISPHAKAVQQWNRVFVSACLVAVFVDPLFFFLLSAIKELKCIVIEPANSPITIAIVIFRSLTDFIYLLHILLQFRLAYVAPESRVVGAGEVVEHPKKIALNYLRGYLVIDIFNVMPVPQVSIILFMLPKFFGSSGAQANTEKNILRVSILLQNLPRLCRFLTLLARQTPSGFIFESAWENFIINLLIFMLSAHVVGSCWYLFGLQRVNQCLRDACHSSNIESCMRFIDCGNGNSVDVFLDPTWSSWINDTSSSACFQKDGGFNYGIYAEAVGLIAINDSVFIQKYVYSLFWGFQQISTLAGNLTPSYFVWEVLFTMAIVGLGLLLFALLIGNMQNFLQALGQRRLEMSLRQRDYDRWMSHRCLPEELRRQVRSAERYNWVASRGVNEEKLLENLPEELQRDIRRHLFKFVKKVRIFSIMDDQLIDAICERLKLKIFIEESKILYPGGAIEKIIFIIRGKVESIEDKTIVSLSEGDVCGEELLTWCLEHYSVNKNGRKVKISGQRVLSNRTVRCLTNVEAFVLQVSDLEEVTSLYARFLRNQRVLGAIRYESPYWRAFAAKCIQVTWRYHRRRRTRYAGTCSYPPQSNHSLINS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1092 739 SMART cnmp_10 561 695 IPR000595 -
Apr3g1092 739 SUPERFAMILY Voltage-gated potassium channels 154 489 - -
Apr3g1092 739 Pfam Ion transport protein 158 489 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr3g1092 739 ProSiteProfiles cAMP/cGMP binding motif profile. 561 628 IPR000595 -
Apr3g1092 739 Gene3D Jelly Rolls 559 682 IPR014710 -
Apr3g1092 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 35 722 - -
Apr3g1092 739 Gene3D Helix hairpin bin 488 553 - -
Apr3g1092 739 Gene3D - 163 486 - -
Apr3g1092 739 SUPERFAMILY cAMP-binding domain-like 489 685 IPR018490 -
Apr3g1092 739 CDD CAP_ED 561 685 IPR000595 -
Apr3g1092 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 35 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1092 Apr-Chr3 25531400 25538892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1092 98 638 Ion Channels AT3G17700 58.727 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1092 K05391 - sly:101253874 818.535