Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1085 ATGGCGAATGGATTAGAGAGAGAAAGTGGGTTGACAATGTTCAGCGATGAAGAGCTGAGCGAAGTGAGTGGGGTGAAGCGTGTTGGGGACTATGTTGAAGTCACGTGTGGGTGTACCAGCCATAGATATGGTGATGCTGTTGGAAGACTTAGGGTTTTCGTTAATGGGTACCTTGAAATCACTTGTGAATGCACCCCTGGGTGCCAGGAAGACAAGTTGACTCCTTCAGCATTTGAGAAACACTCTGGAAGAGAGACAGCCAGGAAATGGAAAAATAATGTCTGGGTAATAGTTAACGGTGAGAAGGTTCCATTGTTTAAAACAGTGCTGCTCAAATACTACAATCAAGTGTCAAGAGCGGCAAATGGCTCCCATAGATCCCAAAATGGCCGGGCTTGTCACCGTGATGAGTTTGTTCGCTGTACTAGGTGCGACAAAGAGCGTAGGTTTCGTTTGAGGACTAAAGAGGAATGCCGCATTCACCATGATGCTTTGGCAGATGCAAATTGGAAATGTTCTGATCTTTCATATGACAAAATTACATGTGATGATGAAGAAGAACGAGCAAGTCGTAGAGTTTACAGGGGATGCACACGTTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGGTGTGATACATGCCGTTTTTCAGATTGCAGCTGCCAGACTTGCACTGACTTTACAAACAATGCCAAAGCTTAA 711 0.4501 MANGLERESGLTMFSDEELSEVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLFKTVLLKYYNQVSRAANGSHRSQNGRACHRDEFVRCTRCDKERRFRLRTKEECRIHHDALADANWKCSDLSYDKITCDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDTCRFSDCSCQTCTDFTNNAKA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1085 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Apr3g1085 236 PANTHER PROTEIN ULTRAPETALA 1 1 235 IPR020533 -
Apr3g1085 236 PANTHER PROTEIN ULTRAPETALA 1 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1085 Apr-Chr3 25481528 25486582 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Apr3g1085 SAND 8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1085 - - gmx:100796203 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1085 3 25481528 25486582 Apr3g1085 3 25481528 25486582 ECH