Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1082 ATGGGTTGGGAGAGATCTGCTTTGGAGTTCAAGAGAGTGAAGATCTATGGACAAGTTCTATTGGGATTTTTGTTGATATGCACAATTCAGATTTCAAGTTCAGTCACTGATCCCACTGATGTTGCTGCAATTAATAGCTTATATGTTGCACTGGGATCCCCTGTTCTCCCTGGATGGGTTGCTAGTGGAGGAGATCCATGCGGACAAGGGTGGCAAGGCATTCAGTGTAATGGATCATTCATACAAAAAATAGTTCTGAATGCTGCAAATTTGGGAGGAGATCTGGGTGATAATCTGTCAACTTTTGTTTCAATCACAGTAATTGATCTAAGCAACAACAACATTGGAGGAAGTATTCCATCCAATTTGCCAGTTACCATGAAAAACCTTTTTCTTTCAGCCAACCAGTTCACTGGAAATATTCCGACCTCTTTGTCCACTTTGACTGGACTGACAGACATGTCTCTTAACAACAATTTTTTATCCGGAGAATTACCAGATGCTTTTCAGTCACTTACACAATTGATCAATCTAGATTTATCTCAAAATAATTTGAGTGGGGAATTGCCTCCTTCTATGGATAGCTTGTCAGCCCTGACCACCCTACACTTGCAGAACAATCAACTGTCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTTGAAAACAACCAGTTTGCTGGCCCAATACCCCCAAAGTTGTTAAACATCCCTAACTTCAGACAAGCTGGAAACCCATTTAATGTTAATGGTACTGCAACTCCTGCTTCTTCACCTCGCTCCCCAGTGACAGCACCACCAGGAACTCCAGTTTCCACGGCACCATCTTCTGGCCGTGTACCTGCAAAACAGGCTGATGGACCAACTGCAGTTAACGAATCACATTCTGGGAAGTCCAAAAAAACCACCAAAAGGGTGGTTTGGATATCTATTGCTAGTGTGATGGGATCCATTATTTTGTTACTAGGACTCATTCTATTTATTCCAAGATGTAGCAGAAGGGAACGGGTTGACAGAAGGTCTAAGCGACATCAAATTGGTGCATACGGTGAAAGACAAAATGCCAGGGATTACGGGGCTATAGTCCAGCCACCTAGTCAAACAGAGAAAGTACCTGTTGGGGATGCTCCAAGGCCAAAAGAGGGTCATCAAGCAGAGACCAGGGGAGTGGGGGTTATTCCAAATCCACAGGGAAAGCAGGAGAAGCAAGAGAAGGATGTGGAAAGAGTGGCAACAATACCAAAGCCAGGAGATCATGAGATAGATATGAGTACTCTTGAAGTATATGCGATGCCTCCCCCTCCCCCTCCACCCCCACCACCCCCTCCCCCTCCCCCTCCCCCGCCTCTACCCACATCATCTCTCTCTACTGAGAGGGTGATTGTTGAGCCAACCACATTCCATAGAGGGACTAATGTTAATCCATCCATAAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAATTTTTCACCATTGCATCCCTTCAACAGTATACAAATAGTTTTTCTCAAGACAATCTTATAGGAGAAGGCATGCTGGGTAGCGTGTATAGAGCAGAGCTCCCTGGTGGGAAGCTGCTTGCTGTAAAGAAACTGGACAAGAGAGTTTCTGATCACCAGAAGGATGATGAATTTCTTGAGTTGGTAAATAGTATTGACAGAATACGACATGCAAATATTGTTGAGCTTGTTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGTACTGCAATAATGGGTCATTGCATGATGCACTTCACTCAGACTATGACTTCCAAACAAAACTCTCGTGGAATGCTCGTATTCGGATAGCACTTGGAGCAGCTAGAGCCTTGGAATATCTGCATGAGCTATGTCAGCCACCCGTGGTGCATAGAAATTTGAAATCCGCCAATATTCTCCTTGATGATGATCTATCTGTGCGGGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCAGGATCTGTCAGTCAGCTCTCGGGGAACCTGCTATCAGCTTATGGATATGGGGCTCCGGAATTTGAGTCTGGAATTTACACATACCAAAGTGATGTGTTCAGCTTTGGAGTGATTATGTTAGAACTTTTGACTGGCCGTCAGTCCCATGACAGGACACGTCAACGAGGGGAGCAATTTCTGGTCAGATGGGCAGTTCCCCAACTTCATGATATTGATGCATTATCAAGCATGGTTGATCCTTCTTTAAATGGAAATTACCCGGCAAAATCGTTGTCCAATTTTGCAGACATTATTTCTAGATGTCTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTGGTCCTATACTTACTAAATATGATAAGGAAGGAGTCTCAGCAAAGTGAAGCAAATCAAAATTGA 2394 0.4394 MGWERSALEFKRVKIYGQVLLGFLLICTIQISSSVTDPTDVAAINSLYVALGSPVLPGWVASGGDPCGQGWQGIQCNGSFIQKIVLNAANLGGDLGDNLSTFVSITVIDLSNNNIGGSIPSNLPVTMKNLFLSANQFTGNIPTSLSTLTGLTDMSLNNNFLSGELPDAFQSLTQLINLDLSQNNLSGELPPSMDSLSALTTLHLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLNIPNFRQAGNPFNVNGTATPASSPRSPVTAPPGTPVSTAPSSGRVPAKQADGPTAVNESHSGKSKKTTKRVVWISIASVMGSIILLLGLILFIPRCSRRERVDRRSKRHQIGAYGERQNARDYGAIVQPPSQTEKVPVGDAPRPKEGHQAETRGVGVIPNPQGKQEKQEKDVERVATIPKPGDHEIDMSTLEVYAMPPPPPPPPPPPPPPPPPPLPTSSLSTERVIVEPTTFHRGTNVNPSIRSSVPPPTFAKFFTIASLQQYTNSFSQDNLIGEGMLGSVYRAELPGGKLLAVKKLDKRVSDHQKDDEFLELVNSIDRIRHANIVELVGYCSEHGQRLLIYEYCNNGSLHDALHSDYDFQTKLSWNARIRIALGAARALEYLHELCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLSAYGYGAPEFESGIYTYQSDVFSFGVIMLELLTGRQSHDRTRQRGEQFLVRWAVPQLHDIDALSSMVDPSLNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKESQQSEANQN* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1082 797 MobiDBLite consensus disorder prediction 251 307 - -
Apr3g1082 797 MobiDBLite consensus disorder prediction 434 458 - -
Apr3g1082 797 Gene3D Ribonuclease Inhibitor 30 257 IPR032675 -
Apr3g1082 797 Gene3D Phosphorylase Kinase; domain 1 478 584 - -
Apr3g1082 797 Pfam Protein tyrosine and serine/threonine kinase 510 779 IPR001245 GO:0004672|GO:0006468
Apr3g1082 797 SUPERFAMILY L domain-like 43 244 - -
Apr3g1082 797 ProSiteProfiles Protein kinase domain profile. 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1082 797 MobiDBLite consensus disorder prediction 370 460 - -
Apr3g1082 797 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 796 - -
Apr3g1082 797 MobiDBLite consensus disorder prediction 404 427 - -
Apr3g1082 797 Gene3D Transferase(Phosphotransferase) domain 1 585 797 - -
Apr3g1082 797 SUPERFAMILY Protein kinase-like (PK-like) 483 781 IPR011009 -
Apr3g1082 797 PANTHER OS01G0253100 PROTEIN 25 796 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1082 Apr-Chr3 25459619 25467721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1082 31 792 Strubbelig Receptor Gene Family AT4G03390 59.615 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Apr3g1082 PK_Tyr_Ser-Thr 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1082 - - ahf:112737625 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1082 3 25459619 25467721 Apr3g1082 3 25459619 25467721 ECH
Apr2g1943 2 24880461 24886923 Apr3g1082 3 25459619 25467721 PCT