Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1077 ATGGGTTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGCAGCAGGAGCAATGGAGATGTGGTGTCTCCATCTAGCTTAGAAATTGGATGCTGTAGGCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTATTTCTCTGCACCATTTACCATCCTTACCTAGTAGAATTTTCACCAATGGAAAGAGCCGGGCTTCTTGCATATTCACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTTATGTCTGAAGATATGATCTTTTGTGGTGTCTTCGATGGCCACGGTCCACAGGGTCATCTTGTTGCACGCAAAGTGAGGGATGCCTTACCAATAAAATTACTTTCATTTTTGCATGCTGGTGAATCAAAGCGAAATGGGTCAGGTAAAGCTTGCTTCAAAGGGAATGTAAAACCTGATAATGGAGACTCTGAGAAGGATTGCTCTACCGAGGATAAACTGAACACTACATGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCAAATCTGGACTGTTTCTGCAGCGGGAGCACAGCTGTGACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCAATATTGGTGATTCTCGAGCAATCATGGGATCCAAGGATAGCAATGACTCAATGGTGGCCATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGGTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCAGAAGTGCCTAGGGTATGGTTGCCATTTGATGATGCACCAGGATTGGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAATATGGTGTGATTTCTATACCTGAATTTTCTCACCGGTTGCTAACAGACAGAGATCAGTTCATTGTTCTTGCCTCAGATGGCGTGTGGGATGTCTTAAGCAATGAGGAGGTGGTGGAGATAGTATCTTCAGCACCAACACGGGCATCAGCGGCAAGGATTCTGGTAGATTCTGCTGCTAGGGAGTGGAAACTTAAGTACCCTACTTCAAAGATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGACTATGATGAACAAGGCTTTTCATCTGCAACCATCCAAAGCAACCATTCGGGTAACCCAATTGAATCAGATGATGGACAAAAGTCTGAGCCATCTTTGCAAAGGAACTTCACTGTGAGATCCTCTGAAGAAAATGAGACTATTGGAGCAATATCTGTTGATGTTGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGTGTCACCCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCTAAGTCTTGA 1413 0.4409 MGCCVSTSSRSTCSSRSNGDVVSPSSLEIGCCRQKRTRRTFSDHVISLHHLPSLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPQGHLVARKVRDALPIKLLSFLHAGESKRNGSGKACFKGNVKPDNGDSEKDCSTEDKLNTTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRASAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETIGAISVDVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPKS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1077 470 Gene3D - 58 372 IPR036457 -
Apr3g1077 470 SMART PP2C_4 55 368 IPR001932 -
Apr3g1077 470 MobiDBLite consensus disorder prediction 381 426 - -
Apr3g1077 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Apr3g1077 470 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Apr3g1077 470 CDD PP2Cc 72 370 IPR001932 -
Apr3g1077 470 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
Apr3g1077 470 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Apr3g1077 470 MobiDBLite consensus disorder prediction 380 447 - -
Apr3g1077 470 Pfam Protein phosphatase 2C 154 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1077 Apr-Chr3 25417867 25422140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1077 1 470 PP2C-type Phosphatase Gene Family AT1G03590 68.815 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1077 - - gmx:100813306 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1077 3 25417867 25422140 Apr3g1077 3 25417867 25422140 ECH
Apr2g1937 2 24832937 24837515 Apr3g1077 3 25417867 25422140 PCT