Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1054 ATGGCGTCTGGATCTTCGGGTCGTGGTAACTCTGCTTCCAAAGGCTTCGATTTCGGCTCCGATGATATCCTTTGTTCCTACGATGACTACGCTAACCGTGATTCCAGTTCCAACGGCAATCACGCCGATCCTGTCATCGCTCCCAATTCAACTAAGGATTTTCACAAATCTAGGATGGCAAGGACGTCAATGTTTCCTGCTACTGCCTATAATCCGCCTGAAGATTCTTTAAGCCAAGATGTGATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGATTTCTTGAGGGAATTAGTTCAAGGCTGTCACAGTTGGAATTATACTGCTACAATCTTGATAAATCTATTGGAGAAATGAGATCTGATTTAAATCGTGACCATGGGGAACAAGATTCAAAGCTCAAATCTCTTGAAAAGCACCTTCAGGAAGTTCACAGGTCTGTCCAAATTTTAAGAGACAAGCAAGAGCTGGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCAAGTCATTCACAGTCCAATGATGAGAGATCCTCTCCTACCACAGATCCTAAAAAAACAGATAATTCATCTGATGCAAGCAACCAGCAGTTGGCTCTTGCCCTGCCTCATCAAATTGCTCCTCAGCCACAGCCTCCGGCACCCCCAACTCAAGCTCCTGCACCAAGTGTGACTCAAGCTCCTCAACAGCCTCCTTATTACATGCCACCCACCCCTCTGCCAAATCCAGCAGTGGCCCAGCTCCCCCAGAATCAATATTTAGCTTCTGATCAACAATATCGAACACCCCAACTAGTGGCTCCACAACCAACGCCATCACAGGTGACTCCTACCCCACCTGTGCAACAATATTCTCAGTATCAGCAGCCAACGCAGCAGCAGCAGCAACAGCAATGGCCCCAGCAGGTGCAACCCTCCCAGCCACCCCCAATGCAATCTCAAATAAGACCCCCCTCATCTACTGTGTATCCTCCATACCAGCCAAGTCAAGCAGCTAACTCATCACCTACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCACCACCGGGATCTAGCCGCCCCGATGCCATGCCATATGGATATGGAGGGGCTGGTAGAACAGTTCCACAGCAACCTCCACCACCCCAGCAGATGAAGGGCTCTTTTCCTGCACAACCAGGTGAAATGTATGGAACTCCCGGCACCCACCCCTCCCTTCCTCCTCCTGGTAGTGCATACATGATGTATGATGGTGAGGGAGGAAGAGCAACACATCATCCACCCCAACCTCCTCATTTTGCTCAAGCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACTCCCCAGGTCATAACCTTATGGTCAGGAATCCTGGCCAGTCACAATTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTGGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGGCAAGCCATTGATTTCAACTCAGTACTTGACAGGTTGATGAACAACTTTTCTGTCTGA 1590 0.4849 MASGSSGRGNSASKGFDFGSDDILCSYDDYANRDSSSNGNHADPVIAPNSTKDFHKSRMARTSMFPATAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDSKLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNDERSSPTTDPKKTDNSSDASNQQLALALPHQIAPQPQPPAPPTQAPAPSVTQAPQQPPYYMPPTPLPNPAVAQLPQNQYLASDQQYRTPQLVAPQPTPSQVTPTPPVQQYSQYQQPTQQQQQQQWPQQVQPSQPPPMQSQIRPPSSTVYPPYQPSQAANSSPTETLPNSMPMQMPYSGVPPPGSSRPDAMPYGYGGAGRTVPQQPPPPQQMKGSFPAQPGEMYGTPGTHPSLPPPGSAYMMYDGEGGRATHHPPQPPHFAQAGYPPTSASLQNSPGHNLMVRNPGQSQFVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLMNNFSV* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1054 529 MobiDBLite consensus disorder prediction 220 259 - -
Apr3g1054 529 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 526 - -
Apr3g1054 529 MobiDBLite consensus disorder prediction 330 360 - -
Apr3g1054 529 MobiDBLite consensus disorder prediction 279 417 - -
Apr3g1054 529 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 526 - -
Apr3g1054 529 MobiDBLite consensus disorder prediction 292 316 - -
Apr3g1054 529 MobiDBLite consensus disorder prediction 172 208 - -
Apr3g1054 529 Pfam UBA-like domain (DUF1421) 483 526 IPR010820 -
Apr3g1054 529 MobiDBLite consensus disorder prediction 220 258 - -
Apr3g1054 529 MobiDBLite consensus disorder prediction 34 54 - -
Apr3g1054 529 Coils Coil 139 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1054 Apr-Chr3 25242105 25246755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1054 482 525 Trihelix Transcription Factor Family AT5G14540 50.000 1.59e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1054 - - gmx:100782994 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1054 3 25242105 25246755 Apr3g1054 3 25242105 25246755 ECH