Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1049 ATGTCTACCCTTTTCTTCTCTTTCCTTCTTCTCTTCACAAACCTTGTGCTTTTAAGCTCAGTTTCATCCATAGAGTTTGTATACAACACCAACTTCAACTCCACCAATACACTTCTCTATGCCAATGCCACCATTGAATCTTCCATTCTAACCCTCACCAACCGCTCCACCTTCAGTGTGGGACGTGCTTTCTACCCATCAAAGATTCCCACAAAATCTTCTACCTCTTCAACGCCTTTGGCATTCTCAACTTCCTTCATTTTCTCCATTGCTCCATTCAAAGACCTTCTACCTGGCCATGGTTTTGTCTTCATTTTGTCACCTTTTGCTGGCAGCACTGGCGTTAGTTCTGCTCAGCATCTTGGTCTCTTCAACTTGACAAACAACGGTAATCGCAACAACCATGTCTTTGGCATCGAGTTTGATGTGTTTGATAACCAAGAGTTCAATGATATCAATGATAATCATGTGGGTGTGGATATAAACTCTCTTTCTTCTTTTAGTTCACATTCTGCTGGATTTTGGGGTGGGAAAGATGATGATAAGTTTGAGGATTTGAAGCTAAATGATGGTGAGAACTATCAAGTGTGGATTGACTATTTAGGTTCTAGAGTTAATGTTACAATGGCTCGTGCAGGCCAAAAAAGGCCTCAGAAGCCTTTGATTAGTGAGTTTGTGGATCTTTCTGATGTTCTTTTGGATGAAATGTGCGTGGGATTTTGTGGGGCAACAGGGCAGCTTGTGGAGAGTCATAAGATTTTGGCTTGGAGCTTTAGTAACTCAAATCTTTCTATTGGTGATGCTTTGGTGACTACAAATTTGCCTTCATTTGTGCTTCCCAAAGGGACTGTTAGGAGGTCAAAAGGTTTCATTGTAGGGATCAGTGTAGGCTCTCTCTTTGTTATTTGGGGTGCTGTTATGATATTTGTGCTTTTTCTCAGACAAAAAAGGAGCCAAAGAAAGGAGGGAGAAGAAGAAATTGAAGATTGGGAATTGGAGTATTGGCCACGCCGTGTTAGGTATGAAGATATTTATGCTGCTACTGAAGGATTTTCAGACCAAAATGTAATTGGGTTTGGAGGGAATGGGAAAGTCTATAAAGGGCTTATGCAAGGAGCACAAGTTGCTGTGAAAAGAATTGCTTATGACAGTGAATATGGAATGAGAGAGTTTTTGTCTGAGATTTCAAGTTTAGGCAGATTGAAACATAGGAATGTGGTTCCATTGAGAGGTTGGTGTAAGAAAGAGAAAGGAAGCTTGATTTTAATCTATGATTATATGGATAATGGAAGTTTAGAAAAAAGATTATTTGATGGTGATAAGTGCACTACTTTTGGTTGGGAAGAGAGAATCAAGGTGCTAAAGGATGTGGCTGAAGGAATATTGTATTTGCATGAGGGTTGGGAGGTTAAGGTGTTGCATAGAGACATCAAAGCAAGCAATGTATTACTTGATAGGGATATGAATGCAAGGCTGGGGGATTTTGGACTAGCCAGAATGCACCATCATGAGCAGGTTGCTAACACCTCACAAGTGATTGGAACTGTTGGTTTCATGGCACCTGAACTTATTCAAACTGGGAGAGCCTCAACTCACACTGATGTATTCAGTTTTGGTGTGTTGGTTTTAGAGGTGGTGTGTGGAAGAAGACCAAATGACGAAAATAAGCCACCCTTGGTTGCATGGTTGTCGAAGCTAATGGAGAGAGAAGAAGAGTGTTCTGCTCTTGATGAAAGGTTAAAAGGGAGGGATGATTATAGCACTGATGAGGTTAAGAGGGCTCTTCAACTTGGTTTGTTGTGTACTCATCCTGACCCTCATGTTAGGCCAACTATGAGACAGGTTGTGAAGGTGTTGGAGGGAGAGAGTTTAGATATGAGCTTGCTTAACAAAATAAATTCAGCAGCTGCATATGCTGGGAACTTTGGGAACAACATTCACCCAACAATTGAGGAAATTTTCTCCTCTTACTGCTCTTTCACAACCCAATGTGGCATTGAGGGAAGATGA 2010 0.4114 MSTLFFSFLLLFTNLVLLSSVSSIEFVYNTNFNSTNTLLYANATIESSILTLTNRSTFSVGRAFYPSKIPTKSSTSSTPLAFSTSFIFSIAPFKDLLPGHGFVFILSPFAGSTGVSSAQHLGLFNLTNNGNRNNHVFGIEFDVFDNQEFNDINDNHVGVDINSLSSFSSHSAGFWGGKDDDKFEDLKLNDGENYQVWIDYLGSRVNVTMARAGQKRPQKPLISEFVDLSDVLLDEMCVGFCGATGQLVESHKILAWSFSNSNLSIGDALVTTNLPSFVLPKGTVRRSKGFIVGISVGSLFVIWGAVMIFVLFLRQKRSQRKEGEEEIEDWELEYWPRRVRYEDIYAATEGFSDQNVIGFGGNGKVYKGLMQGAQVAVKRIAYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKEKGSLILIYDYMDNGSLEKRLFDGDKCTTFGWEERIKVLKDVAEGILYLHEGWEVKVLHRDIKASNVLLDRDMNARLGDFGLARMHHHEQVANTSQVIGTVGFMAPELIQTGRASTHTDVFSFGVLVLEVVCGRRPNDENKPPLVAWLSKLMEREEECSALDERLKGRDDYSTDEVKRALQLGLLCTHPDPHVRPTMRQVVKVLEGESLDMSLLNKINSAAAYAGNFGNNIHPTIEEIFSSYCSFTTQCGIEGR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1049 669 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 9 626 - -
Apr3g1049 669 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1049 669 PANTHER - 9 626 - -
Apr3g1049 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Apr3g1049 669 Coils Coil 313 333 - -
Apr3g1049 669 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1049 669 ProSitePatterns Protein kinases ATP-binding region signature. 357 378 IPR017441 GO:0005524
Apr3g1049 669 Gene3D Phosphorylase Kinase; domain 1 312 426 - -
Apr3g1049 669 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Apr3g1049 669 SMART serkin_6 351 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1049 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 261 IPR013320 -
Apr3g1049 669 SUPERFAMILY Protein kinase-like (PK-like) 331 624 IPR011009 -
Apr3g1049 669 Gene3D - 21 271 - -
Apr3g1049 669 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Apr3g1049 669 Gene3D Transferase(Phosphotransferase) domain 1 427 635 - -
Apr3g1049 669 CDD STKc_IRAK 357 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1049 Apr-Chr3 25200219 25203940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1049 21 569 Receptor kinase-like Gene Family AT4G04960 60.398 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr3g1049 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1049 - - gmx:100807059 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1912 2 24621828 24624367 Apr3g1049 3 25200219 25203940 PCT
Apr3g1049 3 25200219 25203940 Apr2g1913 2 24625533 24627630 PCT