Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1042 ATGGCAGCAAGTGGTCAAATACCCCACAGGTTCCTCCCCCTTTTGGTTTCGATGATACCCATGTTCCTTCTTTGTTCATCATCGTCTCAGGTTGTCGCAAGGGAGTTTATTGTTGGTGGCAAAGATGGGTGGGTGCTCAAACCTTCCGAAGATTACAATCACTGGGCTCAAAGAAACAGATTTCAAGTCAATGACACTCTCCATTTCAAGTACAAGAAAGAGAGTGATTCGGTTCTGGTGGTGAAGAAAGAGGACTATGATTCATGCAACACCAACAACGCCATACAAAAGATGGACGGTGGAGATTCAATCTTCCAACTCGACAAATCGGGTCTCTTTTTCTTCGTTAGTGGCAACGTTGATAACTGCAAAAACGGTCAAAAGCTTATTGTTCTTGTCATGGCTGTAAGACACAGTCTTCCTCAGCCTCCACCACCGGAGAGTACCTCGCCGCCGAAGGAATCTCCGGCGAAGGATTTGTCTTCTCCGGTTCCGGCTCCGTTGAATAATGTTTCGAGCTCAGCAAGGGTCGGTGTGAGTGTGGGTTTGGGGGTTGTTTTGATGTTAACTGGCTTTGCAGTGCTGGCTTAG 591 0.4721 MAASGQIPHRFLPLLVSMIPMFLLCSSSSQVVAREFIVGGKDGWVLKPSEDYNHWAQRNRFQVNDTLHFKYKKESDSVLVVKKEDYDSCNTNNAIQKMDGGDSIFQLDKSGLFFFVSGNVDNCKNGQKLIVLVMAVRHSLPQPPPPESTSPPKESPAKDLSSPVPAPLNNVSSSARVGVSVGLGVVLMLTGFAVLA* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1042 196 MobiDBLite consensus disorder prediction 141 166 - -
Apr3g1042 196 ProSiteProfiles Phytocyanin domain profile. 34 135 IPR003245 GO:0009055
Apr3g1042 196 Pfam Plastocyanin-like domain 44 127 IPR003245 GO:0009055
Apr3g1042 196 PANTHER BLUE COPPER PROTEIN 15 151 IPR039391 GO:0009055
Apr3g1042 196 CDD OsENODL1_like 34 134 IPR041846 -
Apr3g1042 196 PANTHER EARLY NODULIN-LIKE PROTEIN 2 15 151 - -
Apr3g1042 196 Gene3D - 32 138 IPR008972 -
Apr3g1042 196 SUPERFAMILY Cupredoxins 33 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1042 Apr-Chr3 25138673 25139810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1042 35 167 Phytocyanin Superfamily AT4G28365 52.414 1.84e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1042 - - gmx:100778867 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1042 3 25138673 25139810 Apr3g1042 3 25138673 25139810 ECH