Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1038 ATGGCTTCACCTTCATCTATTTCTTCTTATTCCTTTACCACTTGTTTGTTGATCCTTCTGTTTTTGCATTTGTCATGTTTCATCAACAACCTCAATGCAAAGCACAGTCACAATCGCCAGCACAAGCACCCCAACAGGCACCAACACACTCAGAACCCTGCCTTAAACACAAGACTTCACACAGCTTTTCTTGGGCTCCAAGCATGGAAGAATGTGATCTACTCTGACCCATTTAACTTCACTGCCAATTGGGTAGGTCCTTCAGTTTGCAACTACACCGGTGTGTATTGTGCTCCATCAGTTGATGACCCTAAAGTCACTGTTGTGGCTGGCATTGACCTTAACTTTGGAGACATAGCAGGGTTCCTACCCAACGAAATAGCCCTACTTTCTGACCTTTCACTCCTTCATCTCAGTAACAACCGCTTCTGTGGCATCCTTCCAATGTCCTTAACCAACCTTACTCTTCTCTATGAACTTGATCTTAGCAACAATAGGTTTGTTGGAGCTTTTCCTTTGGTTGTGCTTTCCCTTCCTATGCTCAAATACCTTGACATTCGTTACAATGAATTTGAAGGGCCATTGCCTCCTCAACTCTTCAACAAAACATTTGATGCCATTTTTATTAACAACAACCGCTTCACAAGTTCTATTCCACCAAATTTAGGCCAAAGCTCAGCTTCTGTCATTGTCTTTGCCAACAACAAATTTGGAGGGTGTCTTCCAGAAAGCATAGTAAACTTTGCTGACACTTTGGAAGAACTTGTGTTGATCAACACAAGCTTATCAGGTTGTTTGCCACAGCAAGTTGGGTTTCTCTACAAACTCAAAGTGTTGGATGTGAGTTTCAACAACATTGTTGGCCCAATACCTTATAGCCTTGCGGGGTTGTCTCATTTGGAACAGCTAAATTTGGGGCATAACATGATGAGTGGCATAGTCCCTATGGGTGTTTGCGAGTTACCAAACTTAGCAAACTTCACCTTTTCTTACAACTTCTTCTGTGAGGAAGAGGGTATTTGTCAGAACTTGACATCAAAGAAAATAGTCTTTGATGACCGCAGAAACTGTTTGCCAGAGAAGCCACTTCAGAGGAGCCAAAAGGAATGCAGTGCCAAACTTGAACACCCAGTTGATTGCTTTGAGCTTTGCTGTGTTGAAGGTGGTTTTGGAAGCAATGTTTCTTCTGGTTCAGTGGCTGTTCCACCTTCTTCTATTCATGCATCAATGCCTGTTTCTGCACCACTTCTTGCACCAAGTTACCCATAA 1269 0.4271 MASPSSISSYSFTTCLLILLFLHLSCFINNLNAKHSHNRQHKHPNRHQHTQNPALNTRLHTAFLGLQAWKNVIYSDPFNFTANWVGPSVCNYTGVYCAPSVDDPKVTVVAGIDLNFGDIAGFLPNEIALLSDLSLLHLSNNRFCGILPMSLTNLTLLYELDLSNNRFVGAFPLVVLSLPMLKYLDIRYNEFEGPLPPQLFNKTFDAIFINNNRFTSSIPPNLGQSSASVIVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLKVLDVSFNNIVGPIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKKIVFDDRRNCLPEKPLQRSQKECSAKLEHPVDCFELCCVEGGFGSNVSSGSVAVPPSSIHASMPVSAPLLAPSYP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1038 422 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 421 - -
Apr3g1038 422 PANTHER EXTENSIN-LIKE PROTEIN 8 421 - -
Apr3g1038 422 Pfam Leucine rich repeat 275 332 IPR001611 GO:0005515
Apr3g1038 422 Gene3D Ribonuclease Inhibitor 226 380 IPR032675 -
Apr3g1038 422 SUPERFAMILY L domain-like 66 349 - -
Apr3g1038 422 Gene3D Ribonuclease Inhibitor 64 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1038 Apr-Chr3 25111196 25112464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1038 56 411 Trihelix Transcription Factor Family AT2G15880 50.562 9.85e-134 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1038 - - gmx:100802803 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1038 3 25111196 25112464 Apr3g1038 3 25111196 25112464 ECH