Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1036 ATGGTGCAGTTTCCGCGCTTCCCTTCTCTGTTCTCAGATTCCAACTCAATGGCCACGCTTAGCCATTCACCTACGTTCAGAATCGCCGTCGACGCTCACCACGATCCTCTCTTACCATTTCTCTGGTCTATCAGAAAAGCCCTAGAAGCTTCTAACAATTCTGCTCTGAATCTCTGTAATTTACTCAGAGATTGCATCAGAAACTTCAAGAGCAATGACCGGTACCGAAACGACGTCAGATTTCTCAAGATTTGGCTCCTCTATATGGGAGTTAGTGCGGATTTTGATGGTGTTTTCAAAGAAATGCTGAGCTGTAATGTATGTGCCAACAATTCTTCGCTTTATGTGTGGTCTGCAAGTTTTTTTGAGTTGAAGGGAAGATTGCGTGATGCCCTCACCATCTACAAGCTTGGCATTTCGAGGAAAGCAGAGCCAATTGAGTGGTTGAAGAAGGCGCAGACCTTGTTTCTTGATAGAATTTCTGAAATATGGAATGCTGCTTCGAGTCAGGAGGTTGATTTTAAAGAATCCACGAAATTGGAAAATAACGGCATTAATCCTTGGGACTCCACCACCATGGATAGCCTGTTGAAGAAGATATATCCTTTAATTGTGAAATTTGATGGGTATCATTCGAGCACTAAAGCTTACACAGGAAAAGTGGCCTTATCTACTTCCAAGAATTCATCAAGGAAAAAAGTTATAGAGATAGGTGGAATGAAGTACCATATCAAGGGCTGTGCTGGGCAGGGTGGTTTTGCGCAAGTATATAAGGCATATGTTAACGGTGATTCTGATGATGTGGTTGCACTAAAGATGCAAAAGCCAGCTTTCCCATGGGAATTTTACATGTATCGTCAGCTTGATCATCACATCTCAGATAGAGAGAGGTCAAATTATGGTTTTGCTCATGGAATTCATCTCTATTCTGACTGTAGCATACTCATCTGTGACTATTTAGCTAATGGAACGCTACAGGATGTCGTAAACTCATATGTTGTCATAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACAATAGAAATGTTACGCATGGTTGAAACTTTGCACAATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGCTATGCTAGGGGTAACCTTACAGAAGATGGGTTCTTGGACCGAAGTGGTACATGGTGCGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCAAACGCTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCAGGAGGATAAGCCATGGAAATTTCAGGTAGACGCATACGGGCTTTGTGCTATTGTCCATATGATGTTGCATAATACCTATATGGAAATTGTCAAAAAAGAGCAATCTGATGGGAGTTATGTGTATCTTCCTAGACTACCCTTTAAACGTTATTGGAATGTTGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAACCAATACCCCCACGACAACGATAAAGGGTTGCTGCAGGACTTGAAGAAGCCCTTCCAGGACTATATGGGCTCCGATCCGCAGCTTATAAAGAAACTAAAGGAGTTACTGTCAAAACAAAGGGCTTCCTTGTGTTCCGCATAA 1638 0.4206 MVQFPRFPSLFSDSNSMATLSHSPTFRIAVDAHHDPLLPFLWSIRKALEASNNSALNLCNLLRDCIRNFKSNDRYRNDVRFLKIWLLYMGVSADFDGVFKEMLSCNVCANNSSLYVWSASFFELKGRLRDALTIYKLGISRKAEPIEWLKKAQTLFLDRISEIWNAASSQEVDFKESTKLENNGINPWDSTTMDSLLKKIYPLIVKFDGYHSSTKAYTGKVALSTSKNSSRKKVIEIGGMKYHIKGCAGQGGFAQVYKAYVNGDSDDVVALKMQKPAFPWEFYMYRQLDHHISDRERSNYGFAHGIHLYSDCSILICDYLANGTLQDVVNSYVVIGKSMEEVLCIYYTIEMLRMVETLHNVGLIHGDFKPDNLLIRYARGNLTEDGFLDRSGTWCDQGLCLVDWGRGIDLHLFPDQTLFKGDCRTSGFRCIEMQEDKPWKFQVDAYGLCAIVHMMLHNTYMEIVKKEQSDGSYVYLPRLPFKRYWNVELWKTFFTKMLNQYPHDNDKGLLQDLKKPFQDYMGSDPQLIKKLKELLSKQRASLCSA* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1036 545 Gene3D - 25 177 - -
Apr3g1036 545 PANTHER BUB1 KINASE, ISOFORM A-RELATED 172 544 - -
Apr3g1036 545 PANTHER BUB1 KINASE, ISOFORM A-RELATED 31 168 - -
Apr3g1036 545 ProSiteProfiles Protein kinase domain profile. 242 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1036 545 SMART serkin_6 242 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1036 545 SMART mad3_bub1_i 27 139 IPR013212 -
Apr3g1036 545 ProSiteProfiles BUB1 N-terminal domain profile. 24 177 IPR013212 -
Apr3g1036 545 Pfam Mad3/BUB1 homology region 1 29 139 IPR013212 -
Apr3g1036 545 SUPERFAMILY Protein kinase-like (PK-like) 241 503 IPR011009 -
Apr3g1036 545 Gene3D Transferase(Phosphotransferase) domain 1 240 542 - -
Apr3g1036 545 Pfam Protein kinase domain 242 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1036 545 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 172 544 IPR015661 GO:0007094
Apr3g1036 545 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 31 168 IPR015661 GO:0007094
Apr3g1036 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1036 Apr-Chr3 25097118 25101350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1036 236 375 MAP Kinase Kinase Kinase Kinase AT3G15220 28.369 3.42e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Apr3g1036 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1036 K02178 - gmx:100802272 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1036 3 25097118 25101350 Apr3g1036 3 25097118 25101350 ECH