Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1005 ATGATGAAAGAAAGTTCCAAGGGAAAATGTGGATCTTCCTCCCATCAATCCATGAAAGAGAAGGAAAAACACCTTGTGGATAAAATTCAAGGGATTTTCACCAATCTTCAGTCTGCAAGAAAGGAAGGAAGGACTAATGACATTGTGATCTTTGAGGAGCAGATGCATCAGTTGCTCCGCGAGTGGAAAGCGGAACTGGAGTCTCCGACCACCTCCTTAGCTGATGGAAGCCTTGATTCGTTTACTAGCGAACTTGCCCAACTGTTGCAAGTAATTGAGGAGAAAGATGATGCTATTAGTCCATTAACAAAACCTGAGCCATTGAAGACCGAGCTCCATCCAAATAACATTAGTGATAACAATTATTCGTTTTTTCAGGAGAAATGTTTTGATGATAACCAAACACTAGATCATACTTTCGAAGGCTCTGCTTCAACTCTGTACAACCATGCTCTTAATAACTCAGATATGACACAGTTGGATTATCATCCATTCAGTTTAAATCAAGATTTGAATCACAACACAGGTCACAACTCTGATTTGATTGGTCAGTTTGATTTATACCAGGAACTCAGGTACAACACACAAGTAAAAAACTCACAGTCAACTCAATTTACTTTTGAAGAAGGCTTTGATTGTAGCCAGTTTTTTGGAGCTGATGACACTGTGCAGTGTGGAGAGAATATTATACCTAACATTCTTCCAAATATCCGCCCACCACCTTCTGCTTTTTTAGCCCCAAAATGTGCACTGTGGGACTGTTTCAGACCTGCCCAAGGGGTAGAATGGTGCCAGAACTACTGTAGTAGTTGTCATGAGCTTTTGGCAAATAGTGAGGGTCTTCCTGGCATGACTCCAATTTTGCGACCTGGAGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACGCAGGGAAAAGAAGTGGGCATCCCTAGTTGCGAAGGCGCTGCTTCAACTAAATCACCCTGGAATGCTTCAGAGTTCTTTGATCTTTCCTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAATAGGAAACAGAGATCACTCCCAGATTACAGCGGGCGTGGTTGGCATGAATCAAGGAAACAGGTGATGAAGGAACATGGGGGACAAAAGAGGTCCTATTACATGGATCCACAGCCTCTTAGTTATCTTGAGTGGCATTTGTATGAGTATGAAATCAATAACCATGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTGGATAAAAAGAGAAGTCCTAAAGGAAAAGTGACCAAGGAATCCCTAACTGATTTACAGAACAAGATGGGAAAGCTTAGTGCTGCTGTTCCATCATTCGATGATGGACACCCAATCAAGGGAAAAACAAAGGCCAAGTCTGAGAACATTGAATCTCCTGAAAAGTAA 1449 0.4182 MMKESSKGKCGSSSHQSMKEKEKHLVDKIQGIFTNLQSARKEGRTNDIVIFEEQMHQLLREWKAELESPTTSLADGSLDSFTSELAQLLQVIEEKDDAISPLTKPEPLKTELHPNNISDNNYSFFQEKCFDDNQTLDHTFEGSASTLYNHALNNSDMTQLDYHPFSLNQDLNHNTGHNSDLIGQFDLYQELRYNTQVKNSQSTQFTFEEGFDCSQFFGADDTVQCGENIIPNILPNIRPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANSEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNASEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKRSPKGKVTKESLTDLQNKMGKLSAAVPSFDDGHPIKGKTKAKSENIESPEK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1005 482 MobiDBLite consensus disorder prediction 360 390 - -
Apr3g1005 482 MobiDBLite consensus disorder prediction 454 482 - -
Apr3g1005 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
Apr3g1005 482 MobiDBLite consensus disorder prediction 369 390 - -
Apr3g1005 482 MobiDBLite consensus disorder prediction 1 22 - -
Apr3g1005 482 PANTHER TRANSCRIPTION FACTOR VOZ2 2 476 - -
Apr3g1005 482 MobiDBLite consensus disorder prediction 464 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1005 Apr-Chr3 24867443 24871223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1005 1 458 VOZ-9 Transcription Factor Family AT1G28520 52.165 9.47e-159 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Apr3g1005 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1005 - - gmx:100808629 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1005 3 24867443 24871223 Apr3g1005 3 24867443 24871223 ECH
Apr1g1472 1 24161947 24165571 Apr3g1005 3 24867443 24871223 ECH