Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0996 ATGGCACAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGCCAGAATTTTCTTCTTCTCACCAAAAGATGCCATCCCTCAAAAGCATGTCACCAAATAGTGTAACAAACACAAACGTGTCAAACCAAAACCCTTCATGGGTTGATGAGTTTCTCGACTTCTCGTCGGCGAGACGTGGTGCCCACCGGCGATCGGTGAGTGACTCCATCACCTTCTTGGAGGCACCAATGCTTGATCACCATTGCAAAGGTAGTGGTGACAACGAATTCGAGAGGTTCGATGATGAACAATTCTTGTCCATGTTCAGTGACGAGGCTTCGGGGAATACCATGATGCCACCTCACACGTTGTCCTCTTCCAACCCTTCTACACCGTCCGATCATAATAGCATCAACGATGAGAAAGAAGCCAACAAGGAAAAGGAAGAGGCGGAAGAGAAGAAGCAAGTGAAGAATGAATCCGATGAAGAAAGCCAATGCAAGCTAGAGCTTACACAAGCTCCCAACAATGATGATAGGAATAATAATAATCATAGTAATGCAAATACAACAACTTGTTCTAGTGACAGAATCACTGACCCCAAAAGGGTTAAGAGAATTTTGGCAAATAGACAATCGGCTCAAAGATCAAGAGTGAGGAAGCTTCAATACATATCGGAGCTTGAACGAAGTGTGACTTCATTACAGGCCGAGGTTTCAGTATTGTCTCCACGGGTTGCATTTTTGGATCATCAACGGTTGCTTCTGAATGTTGACAACAGTGCTCTGAAGCAAAGAATCGCCGCGCTGGCCCAAGACAAGATCTTCAAAGATGCACATCAAGAAGCATTGAAGAGAGAGATAGAGAGACTAAGGCAAGTTTATCACCAACAAAACATAAAGAAGATGGACAATGCAGCAGGGTCACCATCCCAATCTCCATCCCTATCACCAAAACCACGATGTGACTCTCATTCAGAAAAGGAACAGCTTATCAATGTTTGA 987 0.4407 MAQLPPKIPNMTPNWPEFSSSHQKMPSLKSMSPNSVTNTNVSNQNPSWVDEFLDFSSARRGAHRRSVSDSITFLEAPMLDHHCKGSGDNEFERFDDEQFLSMFSDEASGNTMMPPHTLSSSNPSTPSDHNSINDEKEANKEKEEAEEKKQVKNESDEESQCKLELTQAPNNDDRNNNNHSNANTTTCSSDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDNAAGSPSQSPSLSPKPRCDSHSEKEQLINV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0996 328 MobiDBLite consensus disorder prediction 13 47 - -
Apr3g0996 328 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Apr3g0996 328 MobiDBLite consensus disorder prediction 1 47 - -
Apr3g0996 328 MobiDBLite consensus disorder prediction 291 328 - -
Apr3g0996 328 Gene3D - 195 266 - -
Apr3g0996 328 Coils Coil 275 295 - -
Apr3g0996 328 Coils Coil 132 158 - -
Apr3g0996 328 MobiDBLite consensus disorder prediction 292 314 - -
Apr3g0996 328 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Apr3g0996 328 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 325 - -
Apr3g0996 328 MobiDBLite consensus disorder prediction 106 129 - -
Apr3g0996 328 SUPERFAMILY Leucine zipper domain 196 250 IPR046347 GO:0003700|GO:0006355
Apr3g0996 328 MobiDBLite consensus disorder prediction 130 161 - -
Apr3g0996 328 MobiDBLite consensus disorder prediction 106 196 - -
Apr3g0996 328 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Apr3g0996 328 PANTHER BASIC LEUCINE ZIPPER 34 1 325 - -
Apr3g0996 328 Pfam bZIP transcription factor 196 240 IPR004827 GO:0003700|GO:0006355
Apr3g0996 328 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 246 IPR004827 GO:0003700|GO:0006355
Apr3g0996 328 MobiDBLite consensus disorder prediction 162 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0996 Apr-Chr3 24800920 24803552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0996 1 273 bZIP Transcription Factor Family AT3G58120 58.667 2.30e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr3g0996 bZIP_2 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0996 - - gmx:100101873 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0996 3 24800920 24803552 Apr3g0996 3 24800920 24803552 ECH