Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0980 ATGCGTCCACCGCGGAAAAGGGTGGATTTTGGAAGAGGAGACAAAGTTGAAGTATGCAGCAAAGAAGAGGGTTTTATAGGTTCCTATTACGAGGCGACGGTCGTGTCCCACCTAGACAACGGTCTTTATGTCGTACGCTACGATACCCTTCTTCAAGACGATGAGTCTCAACCCTTAACAGAAACCCTTTTCCCGAAAGAGCTTCGTCCTTCACCGCCACGTGTCCAAGTTTCCCACTTCTCTCTCTACCAGTGCGTGGATGCCTTCGACAACGATGGCTGGTGGGTGGGTCAGATCACCGGCAAAAGAGGGTCATCCCACTATTACGTTTACTTCGCTACCACCAATGAAGAGATTGCGTACCCTTCTTCTAAGATCAGGCTTCATCACGAGTGGCTTCAGGGCGAATGGGTCTTGTCCAATTCCTGA 429 0.5012 MRPPRKRVDFGRGDKVEVCSKEEGFIGSYYEATVVSHLDNGLYVVRYDTLLQDDESQPLTETLFPKELRPSPPRVQVSHFSLYQCVDAFDNDGWWVGQITGKRGSSHYYVYFATTNEEIAYPSSKIRLHHEWLQGEWVLSNS* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0980 142 PANTHER - 7 140 - -
Apr3g0980 142 SMART agenet_At_2 8 76 IPR014002 -
Apr3g0980 142 SMART agenet_At_2 78 134 IPR014002 -
Apr3g0980 142 CDD TUDOR 13 48 IPR002999 -
Apr3g0980 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 140 - -
Apr3g0980 142 Pfam Agenet domain 13 73 IPR008395 -
Apr3g0980 142 Gene3D - 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0980 Apr-Chr3 24691626 24692295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0980 20 132 PHD Transcription Factor Family AT5G58610 32.090 1.93e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0980 - - gmx:106794115 248.44