Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0966 ATGGCCTCCATGCCCTTGGGGCACCACCACCAACCACCGCTGGCGCCGCTTACGCAACCATCTCAACCGCCACAGTTTCAGGCGCAACCTGAAGTGGCTCGCCGGAGCTCCGATGTGGAGACTGACAAGGAAATGTCAGCTACGGTAATTGAAGGGAATGATGCAGTCACTGGCCACATAATTTCCACCACAATTGGAGGCAAAAATGGTGAACCAAAACAGACTATCAGTTACATGGCAGAACGTGTTGTAGGCACTGGATCATTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAGACTGGGGAGGCAGTGGCTATTAAAAAGGTCTTGCAAGACAGGCGGTACAAAAATCGTGAGCTGCAGTTAATGCGCTTGATGGATCACCCAAATGTGATTTCCCTGAAGCATTGTTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACAATGGACCGAGTTATAAAGCACTACAATACTATAAACCAGAGAATGCCTCTCATCTATGTGAAACTGTATACTTATCAAATCTTTAGGGGATTAGCATATATCCATACCGTTCTGGGAGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTTCATCCTCTTACCCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCCAAAGTTCTGGTCCGGGGTGAATCAAACATTTCATACATATGTTCACGTTATTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCTGCTGGTTGTGTCCTTGCTGAACTTCTTCTAGGACAGCCATTATTTCCTGGAGAAAATCAGGTGGAACAACTTGTGGAAATTATCAAGGTTCTTGGTACTCCAACTCGAGAGGAAATACGTTGCATGAATCCGAATTATACAAATTTTAGATTCCCTCAGATTAAAGCTCATCCCTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTAGCATCAAGGCTTCTCCAATATTCACCTAGTCTTCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCAAATGCCCGTCTACCTAATGGACGTCCACTGCCCCCACTTTTCAACTTTAAACAGGAATTAGCTGGAGCATCACCTGAACTGATCAATAGGCTCATCCCGGAGCATATTAGGCGGCAGACTGGTTTCAGCTTCTCTCATTCTGCCGGTACATAA 1257 0.4511 MASMPLGHHHQPPLAPLTQPSQPPQFQAQPEVARRSSDVETDKEMSATVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMDRVIKHYNTINQRMPLIYVKLYTYQIFRGLAYIHTVLGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVRGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVEQLVEIIKVLGTPTREEIRCMNPNYTNFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELAGASPELINRLIPEHIRRQTGFSFSHSAGT* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0966 418 Gene3D Phosphorylase Kinase; domain 1 63 157 - -
Apr3g0966 418 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0966 418 Gene3D Transferase(Phosphotransferase) domain 1 158 405 - -
Apr3g0966 418 Pfam Protein kinase domain 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0966 418 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 18 411 - -
Apr3g0966 418 MobiDBLite consensus disorder prediction 1 50 - -
Apr3g0966 418 SMART serkin_6 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0966 418 CDD STKc_GSK3 73 365 IPR039192 -
Apr3g0966 418 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA-LIKE 18 411 - -
Apr3g0966 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Apr3g0966 418 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Apr3g0966 418 SUPERFAMILY Protein kinase-like (PK-like) 77 386 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0966 Apr-Chr3 24560297 24576650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0966 84 400 MAP Kinase Gene Family AT2G43790 35.258 5.45e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Apr3g0966 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0966 K14502 K00924 gmx:100810924 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0966 3 24560297 24576650 Apr3g0966 3 24560297 24576650 ECH
Apr1g1544 1 24945478 24953477 Apr3g0966 3 24560297 24576650 ECH