Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0964 ATGATGTCCAGGTCGTATACAAATCTTTTAGATTTGGCTTCCGGGAATTTCCCAGCAATGGGGAGGGAAACTAGGGAACGGAGGCGGTTGCCAAGGGTTATGAGTGTTCCGGGGATTGTCACTGAGCTAGATGATGATCAGGCAGTTAGTGTTTCATCTGATAATCCGTCAACTGTTTCTACCGATCGGATGATTATTGTAGCAAACCAGCTACCGGTGAAAGCAAAGCGAAAAGAGGACAATAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCATTGCTTTTACAGCTGAAGGACGGATTTCCTGAGGATATGGAAGTTCTTTATGTTGGGTCGTTACGTGTTGACATTGATCCAGCGGAACAAGATGACGTTTCACTACATTTGTTGGATAAATTTAAATGTGTCCCGACTTTTCTGCCCGCTGACGTTTTGTCAAAATTTTATGATGGTTTCTGTAAAAGGCAGTTATGGCCACTTTTTCATTACATGTTACCGTTTTCAACAGACAAAAGCCACCGATTTGATCGCACTTTGTGGGAAGCCTACGTGTTGGCAAATAAGCTATTTTTTCAAAAGGTAGTTGAAATAATAAACCCAGAGGATGACTACATTTGGATTCATGATTATCATTTGATGGTGCTGCCAACTTTTTTAAGAAGGCGTTTTAACAGGGTCAAGATGGGATTTTTTCTGCATAGCCCCTTTCCATCATCAGAGATATATAGGACTCTTCCGGTCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATTGGATTCCATACCTTTGACTATGCCCGCCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTATTTAGGATTGGAGTATTATGGAAGGACTATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGGATTGAATCAGTTATGAGAATGGCAGATGAGGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATCTTGCTTGGTATTGATGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTGCAAGAGGTAAAGGGATACATATAGAGGAGATACACACTGAAATACAAGAAAGCTGCAGCAGGATCAACAGAGTGTTTGGGCGACCTGGTTACGAACCAATTGTTTTTATTGATAGATCGGTTCCTTTTGCTGAAAAAGTTGCCTATTACAGCATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTGACTCCTTATGAGTATATCGCTTGTAGACAGGGAATATCTAGTTCTGAATCATGTTCCAACGTCAGTGACCCAAAGAAGAGTATGCTAGTAATATCAGAATTTATTGGCTGTTCTCCATCACTTAGTGGGGCTATCCGTATAAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGAGTGATGGAGAGAAACAGCTGCGGCATGAGAAGCATTACCGATATGTCAGCACTCATGATGTGGCTTACTGGTCACATAGTTTCTTGCAAGACATGGAGAGGGCTTGCTCAGACCTTTTAAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTGTCGATTGATGCTATGGTCTCAGCTTACAAGAGGTCAAAGAGTAGGGCCATATTGTTGGACTACGATGGTACTGTGATGCCACAAAACTCCATTAATAAGAGTCCAAGCAAGGAGGTCTTGTCTATTTTGGACACACTCTGTGCAGACACCAAAAATGCAGTTTTCATTGTTAGTGGACGGGGAAGGGAGAGCTTAACTGAGTGGTTTGCTCCCTGCAAAAAGCTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGATGGTCCCAGAATGGAGAGTGGAAAATATGTGGTAAGTGCTTCGAATTTGGATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCTACTGATGGTTCCAGCATTGAAAGAAAAGAGAGTGCTTTGGTCTGGCAATACCGTGATGCTGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCAGTGAAGAGTGGCCAATTCATTGTTGAAGTAAAGCCACAGGATGTGAGCAAAGGCTTAGTGGCTGAAAGGATATTTTCGTCAATGGCTGAGAAGGGTAAACAGGCTGACTTTGTTCTCTGTGTTGGTGATGACAGATCTGATGAGGACATGTTTGAAATAGTTAGTAATGCAATCTCAAGGAATATTCTTGCCACCAATGCTTCTGTATTTGCGTGCACGGTTGGACAAAAACCAAGCAAAGCAAAGTATTATCTGGATGATACAACTGAAGTAATAAGCATGCTAGAATCTTTGGCCGAAGAATCTGATTCCTCACCCTGCATAGATGAAACTGAGGATTCCTCTTGGAAGGCAAATGTGAGTTGA 2592 0.4201 MMSRSYTNLLDLASGNFPAMGRETRERRRLPRVMSVPGIVTELDDDQAVSVSSDNPSTVSTDRMIIVANQLPVKAKRKEDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDIDPAEQDDVSLHLLDKFKCVPTFLPADVLSKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEECKVRELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHIEEIHTEIQESCSRINRVFGRPGYEPIVFIDRSVPFAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISSSESCSNVSDPKKSMLVISEFIGCSPSLSGAIRINPWNVETTAEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSHSFLQDMERACSDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRSKSRAILLDYDGTVMPQNSINKSPSKEVLSILDTLCADTKNAVFIVSGRGRESLTEWFAPCKKLGIAAEHGYFLRWSQNGEWKICGKCFEFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMAEKGKQADFVLCVGDDRSDEDMFEIVSNAISRNILATNASVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSSPCIDETEDSSWKANVS* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0964 863 MobiDBLite consensus disorder prediction 843 863 - -
Apr3g0964 863 Gene3D - 592 681 IPR023214 -
Apr3g0964 863 Gene3D - 721 852 IPR023214 -
Apr3g0964 863 SUPERFAMILY HAD-like 593 841 IPR036412 -
Apr3g0964 863 Gene3D Glycogen Phosphorylase B; 317 530 - -
Apr3g0964 863 TIGRFAM T6PP: trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Apr3g0964 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 549 - -
Apr3g0964 863 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 595 799 IPR006379 -
Apr3g0964 863 CDD HAD_TPP 594 833 - -
Apr3g0964 863 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 854 - -
Apr3g0964 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 854 IPR001830 GO:0003824|GO:0005992
Apr3g0964 863 Gene3D Glycogen Phosphorylase B; 56 316 - -
Apr3g0964 863 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Apr3g0964 863 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Apr3g0964 863 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0964 Apr-Chr3 24543323 24550298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0964 1 847 Trehalose Biosynthesis Gene Families AT1G06410 78.512 0.0 1387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0964 K16055 - gmx:100800847 1602.42