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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Apr3g0958
ATGGCTTCAGAGAAGAAACTTTCAAACCCAATGAGGGAGATCAAGGTTCAGAAGCTCGTTCTCAACATCTCAGTTGGTGAAAGTGGAGATCGTCTCACCAGAGCTGCCAAGGTGCTTGAGCAACTCAGCGGTCAAACCCCAGTGTTTTCCAAAGCAAGGTACACTGTTCGTTCATTTGGGATTAGACGTAATGAGAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTGAGAAGGAACTTCAGTGATACTGGCTGTTTCGGCTTTGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGGATTTCTACGTTGTTCTGGAGCGTCCTGGGTATCGTGTGGGACGTCGCCGAAGGTGCAAGTCTCGTGTTGGGATTCAGCACCGTGTCACAAAAGAGGATGCTATGAAGTGGTTCCAGGTGAAGTATGAGGGAGTAATCCTTAACAAGGCCCAGACAATTGTTAGTTAG
549
0.4536
MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQTIVS*
183
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Apr3g0958
182
ProSitePatterns
Ribosomal protein L5 signature.
39
55
IPR020929
GO:0003735|GO:0005840|GO:0006412
Apr3g0958
182
Gene3D
-
2
177
IPR022803
-
Apr3g0958
182
PANTHER
60S RIBOSOMAL PROTEIN L11-RELATED
1
181
IPR002132
GO:0003735|GO:0005840|GO:0006412
Apr3g0958
182
Pfam
Ribosomal protein L5
9
62
IPR031310
-
Apr3g0958
182
SUPERFAMILY
RL5-like
8
173
IPR022803
-
Apr3g0958
182
Pfam
ribosomal L5P family C-terminus
66
164
IPR031309
-
Apr3g0958
182
PANTHER
60S RIBOSOMAL PROTEIN L11-1
1
181
-
-
Apr3g0958
182
PIRSF
RPL5p_RPL5a_RPL11e_RPL5o
1
172
IPR002132
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Apr3g0958
Apr-Chr3
24496261
24498502
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Apr3g0958
1
181
Cytoplasmic Ribosomal Protein Gene Family
AT5G45775
95.028
1.55e-129
359
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Apr3g0958
K02868
-
nnu:104609743
342.428
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Apr3g0958
3
24496261
24498502
Apr3g0958
3
24496261
24498502
ECH
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