Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0957 ATGAGCCGCAGCATGAACAATTTCACACCTTTTCCAGGGCCATGGCAAAGAAGTTTTAGATCCTATGATGGCCACCCTTTTAGCAACCTTGAATCCAGTGAGGTGCCTGTGATTTATAGACCTCGTTCTACTCATACCAATGATGACAGGAATTCAGGTTTATCAGCTCAACAACGTTTTTGGGACTTCATGACTCCCATAGGATTCCACAACATACCAGATTTTCCAGCACCACCACCTAGGAGACAACATATTCATGTTCACAGTGGGGATAGGGGAAGGCCCAGAGAGATTTTCCTTCAGCCACCTTCAAGATCCACATTCCAAGCAAGCTCACAAGTTCCCCCTGCAGTAGAAATTCCCAAATCAACTGTTTTGAGCAAGCTTAAGAAAGTAGTCTATGACCCTCCGCCAAGGCAGTATGCTAGGAGGGTGGGCTTATATTATAGAAATAATGCTTCAAATTCATTCAAAGAGAAGGAGAGAGAAAAGGATGAAGATGGTAAGAGGTGTGCTATTTGCTTGGAGGATTTTGAAGCCAATGAAGAGGTGATGCTCACTCCATGCAAGCACATGTTTCATGAAGATTGCATAGTACCATGGCTAACAAACAAAGGGCAGTGCCCAGTTTGTAGGTCTGTGATTTGGGAGAGAGGGAGGGAAAACCCTTCATCCTTCAACAGAAATCACATTGCCAATTTGGCACCTAACAACCTGATTCATGCAGAGTTATTGTCAATTTTGAGGACCATGGAAGACGCTTTTCCATTTGACAGCATGACTTATTACTAA 792 0.4356 MSRSMNNFTPFPGPWQRSFRSYDGHPFSNLESSEVPVIYRPRSTHTNDDRNSGLSAQQRFWDFMTPIGFHNIPDFPAPPPRRQHIHVHSGDRGRPREIFLQPPSRSTFQASSQVPPAVEIPKSTVLSKLKKVVYDPPPRQYARRVGLYYRNNASNSFKEKEREKDEDGKRCAICLEDFEANEEVMLTPCKHMFHEDCIVPWLTNKGQCPVCRSVIWERGRENPSSFNRNHIANLAPNNLIHAELLSILRTMEDAFPFDSMTYY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0957 263 SUPERFAMILY RING/U-box 161 218 - -
Apr3g0957 263 SMART ring_2 171 211 IPR001841 -
Apr3g0957 263 Pfam Ring finger domain 170 212 IPR001841 -
Apr3g0957 263 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 2 262 - -
Apr3g0957 263 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 262 - -
Apr3g0957 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 216 IPR013083 -
Apr3g0957 263 ProSiteProfiles Zinc finger RING-type profile. 171 212 IPR001841 -
Apr3g0957 263 CDD RING-H2_PA-TM-RING 171 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0957 Apr-Chr3 24493196 24495159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0957 125 257 C3H Transcription Factor Family AT3G58720 47.482 1.62e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0957 - K11982 gmx:100810607 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0957 3 24493196 24495159 Apr3g0957 3 24493196 24495159 ECH