Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0946 ATGAGTGAGAAAGAAGTCCAAGAACCTATGGCTAGTCGAGGAAGCAAGAGAACTATAATTGAAAGAATTGAAGGCAGTGATGACCAAGGTTACACCAACAGTCAGGGTGGAAATTCCATGGACAAGTTTGGAAAAGGAAATAGTTCTTCCCATGCAGCTGATGTGGCTTTAGCCAGAAAGATGAAGGCCGTAGCCAACTTGGAGGTTGATGGTTCAAAAGTGAATTCCCAGGTTCCAGCATGTCCTCTAGGAAAAAATGCACAAGCTACAGCTTCAAGAGTGGATACTTCCACAAACCAAAGAAATTCTGATTTTTACATAGACCGGGTATGTGACCTTATCGTTGGAATGTCACTATATACTGAGCCAACCAAATCAAAAGTACGCGAACTTGCACATAGGGCTATGTATGAGTTATCAAAAGTAGCTGTTGCTGGAAAACCCTTATGGAAATCACAAAATGGCCAAAAGTTTGAGACTATGGATAATATTGAATATTTGAGAACTTATGCTGGCCTTGAGGAAACCATAGACGGGATTAAAAATTTGATTAAGGTTGGAGATCATCAAGATTTTCCAAGCTTCAAGTCACTTAGAGTTGGATATGCTCCTAAGCCAAAACCACCTCCAAGAGAACGTAACACTATCGAATCTTCTCGAGTTATAAAAGAAGTTAAAATGGATCCACTTAACATTGTTCAATTACTCATGAATGTGATGAATGCTGAATTTCAGTTGCCTACACCATTTGTGGCTACCAGAGAATGTTATTTTGTAAGGTACTCTAAGAAGCTATCTGATGATATCTGGGGCGTTGCGGATATTTCGATGGAAAAGATTTTCCCTTCACCAGATATCAAATTTCGAAGAAGGCCATCAGGTTGTTTGATTAAAGCAATGCCAAATGGATACTCTAAGGTTATATGGGTGGAGCATGCGGTAGACAATGACGAGTATAGCATGCATTTCAGCCAAGTAGTTTCTTCAGGTTTGGCCTATGGTGCATCGCGTTGGGTTGATTCTTTGGTTCGAAGTATTGAATGCTATGGAATTCCGAAAACAGTACCCATTCCATTACATGACGAGATTACTGAAGCGGGGAAAGAAAGTCTCTTAAATCTGGCAGAAAGAATGATGAGAAGCTTTTGTTGTGATATCAGTGCTTCTTACAGAAACGACTGGACAACCGTTAAATCACTTCTTGGCTTTCATGAAGTGAAGGTCAAGGTTAAGGATATTATAAGCGATTTTGGAAGACCTCGAGGTGCAACAGTGATTTTCTCTAGTTCTGCTTGGCTCCCAACCTCGCCGAACATATTATTTGACTTCCTTCGTGACCCCACTTGTAGAAAGAAGTGGGACTTGCTTTCAACTAAGTGTGATTCTGTTCGAGAGATATCCTACGTTATTCAAGGCAATGATCCGAGGAATCGTGTTTCCATCATTCAACTGAAGGACGGTATCAATGATATGCTGTATGTGCAAGAGAGTTACATAGATTCAACAGACACCGCCCGCATAGTTTATTCTCCAATACACAAGTTAGCTCTGTCATATCTTATCAATGGAGCAAATCCACTTTATGTGTCTATTGAACCTTCAGGGTTTACTATCTTTCCTGATGGTGGGATGCCATTGAAAGGTGATGATAACAGTGGTGGTGGAAGCATTTTAACTATTGCATTTTCTATCATGCTAAGTACCGCAAAGGTTACGCCACTCATTGTTCCTCCTGGAGCAATAGCTAGGTTCAAAAATTTAAGTGTTCACACACTTAATGGTATAAGGGATGCGCTTCTCCAGGACAATGCATCGATAATGCAAAATTTCATAGCTTCGAAGTGA 1845 0.4038 MSEKEVQEPMASRGSKRTIIERIEGSDDQGYTNSQGGNSMDKFGKGNSSSHAADVALARKMKAVANLEVDGSKVNSQVPACPLGKNAQATASRVDTSTNQRNSDFYIDRVCDLIVGMSLYTEPTKSKVRELAHRAMYELSKVAVAGKPLWKSQNGQKFETMDNIEYLRTYAGLEETIDGIKNLIKVGDHQDFPSFKSLRVGYAPKPKPPPRERNTIESSRVIKEVKMDPLNIVQLLMNVMNAEFQLPTPFVATRECYFVRYSKKLSDDIWGVADISMEKIFPSPDIKFRRRPSGCLIKAMPNGYSKVIWVEHAVDNDEYSMHFSQVVSSGLAYGASRWVDSLVRSIECYGIPKTVPIPLHDEITEAGKESLLNLAERMMRSFCCDISASYRNDWTTVKSLLGFHEVKVKVKDIISDFGRPRGATVIFSSSAWLPTSPNILFDFLRDPTCRKKWDLLSTKCDSVREISYVIQGNDPRNRVSIIQLKDGINDMLYVQESYIDSTDTARIVYSPIHKLALSYLINGANPLYVSIEPSGFTIFPDGGMPLKGDDNSGGGSILTIAFSIMLSTAKVTPLIVPPGAIARFKNLSVHTLNGIRDALLQDNASIMQNFIASK* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0946 614 MobiDBLite consensus disorder prediction 1 24 - -
Apr3g0946 614 SUPERFAMILY Bet v1-like 212 349 - -
Apr3g0946 614 SMART START_1 130 348 IPR002913 GO:0008289
Apr3g0946 614 MobiDBLite consensus disorder prediction 27 46 - -
Apr3g0946 614 PANTHER PROTEIN FWA, PUTATIVE-RELATED 238 602 - -
Apr3g0946 614 PANTHER PROTEIN FWA, PUTATIVE-RELATED 53 239 - -
Apr3g0946 614 MobiDBLite consensus disorder prediction 1 49 - -
Apr3g0946 614 ProSiteProfiles START domain profile. 121 351 IPR002913 GO:0008289
Apr3g0946 614 Pfam START domain 219 343 IPR002913 GO:0008289
Apr3g0946 614 SUPERFAMILY Bet v1-like 365 564 - -
Apr3g0946 614 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 239 IPR042160 -
Apr3g0946 614 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 238 602 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0946 Apr-Chr3 24380001 24385582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0946 112 602 Homeobox Transcription Factor Family AT4G04890 35.046 1.31e-90 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0946 K09338 - jre:108992281 353.984