Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0940 ATGCGTCACCTTAAGTTGCTCCAATTTAGTCCCGTGGATTTTTGCGGAAGGCTTGATTTTCTTTCCAATGAATTAAGATATCTTAGTTGGTGTATATATCCTTTTGATTATTTGCCATCAAATTTTCAGCCAGACAACCTTGTTGGGTTGATCCTGAATGACAGTCGCATTAAGAAATTGTGGAAAGACACAAAGCCTCTACCCAATTTGAGACTTTTGGATCTCTACCGCTCGGAAAGTCTCATCGAGTTACCACATTTTGGAGAGGCCCCAAATCTTGAGCGGCTATGTCTCAAAGGATGTATACAGCTCAGGCAGATCGATGCATCTATAGGTCTTCTAAAAAAGCTCACTGAATTGGATTTGAGAGAATGTGAAAATCTCATAAGCGTGCCCAGCAGCATACTGGGCCTCAATTCTCTTGAATATCTGAGTCTCTCTGGTTGTTCAAAACTGCGTATGCTTTTAGACGAACCAAGGGATGGAGAGCATTTGAAGAAGCTTTGTAGAGGTGAAGCTCCTATTCATTCCCTATCAGCATCCTCCATACTTCCAGAAGATTTGTGTAGTATCTCACGTATGCGTGAACTTGATCTAAGTTACTGCAGTTTACGTCAAATCCCTGATACTATTGGAAATTTACATTGCTTAGAATGGCTAAATTTAAGGGGAAACAAATTTGGCACACTACCGAGCCTGAAGGAGCTTTCCAAACTGTATTATATAAACTTGGCGAGTTGCAAGCAGTTGAAATGTTTGCCTGAGCTACCTTCACGAACTCACTTGTCATCAGAAATTTACCTGTCGCCATTTCGAGATGTCATCGGAAGCCGAGGAATAAACATTTTCGACTGCCCAGAATTAGTTGACAGGGAAGGGTGCAGTAGCATGTGTTTTTCATGGATGATGCAAATTGTTAAGGCCCACCATCAATACCCACGTTTTAGCCCTTTGCGTAAGCCTTGTGTTGAAAGTGTTATTCAAGGAAGCGAAATACCAAGGTGGTTCAACAATCAGCATGAGGGGATGGGCAATTTAATGATCATAGACACACCTCCGCTTATTCAGCATGACAATAATTGGATTGGCATTGCGTGTTGTGTAATATTCAGGTTTCATGACCGAATGATAACAACTTTGCCGATTTTTCCTCTGAGAACAGAACCACTACATACTCTGGGTGTTGAGATTCCATGGGTACCTTTCAATGAAGAAGATATGAAGACATCAGATCGCATCTGGCTATTCTATTTCACTCGACAACAACTAATCAGCCAATGTTGCGTGGGCCGCATGCCTGATCGTGCTGACTTCAAATTCAAATTTGAAATACGACGCACACCATTATTTGAGAGTAGGGTGAAGGAATATGGGTATCGTTGGGTGTACGAGGAGGATGTAAAACATTCCAACGTCACAACGATGCACAGCGGAGACTTGTTGCCTCAGAAACGAAAAGCTTTTGGCAATTGA 1473 0.4196 MRHLKLLQFSPVDFCGRLDFLSNELRYLSWCIYPFDYLPSNFQPDNLVGLILNDSRIKKLWKDTKPLPNLRLLDLYRSESLIELPHFGEAPNLERLCLKGCIQLRQIDASIGLLKKLTELDLRECENLISVPSSILGLNSLEYLSLSGCSKLRMLLDEPRDGEHLKKLCRGEAPIHSLSASSILPEDLCSISRMRELDLSYCSLRQIPDTIGNLHCLEWLNLRGNKFGTLPSLKELSKLYYINLASCKQLKCLPELPSRTHLSSEIYLSPFRDVIGSRGINIFDCPELVDREGCSSMCFSWMMQIVKAHHQYPRFSPLRKPCVESVIQGSEIPRWFNNQHEGMGNLMIIDTPPLIQHDNNWIGIACCVIFRFHDRMITTLPIFPLRTEPLHTLGVEIPWVPFNEEDMKTSDRIWLFYFTRQQLISQCCVGRMPDRADFKFKFEIRRTPLFESRVKEYGYRWVYEEDVKHSNVTTMHSGDLLPQKRKAFGN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0940 490 ProSiteProfiles Leucine-rich repeat profile. 216 237 IPR001611 GO:0005515
Apr3g0940 490 Pfam C-JID domain 328 467 IPR045344 -
Apr3g0940 490 Gene3D Ribonuclease Inhibitor 175 338 IPR032675 -
Apr3g0940 490 Gene3D Ribonuclease Inhibitor 1 174 IPR032675 -
Apr3g0940 490 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 176 475 - -
Apr3g0940 490 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 158 - -
Apr3g0940 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 158 IPR044974 GO:0006952
Apr3g0940 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 176 475 IPR044974 GO:0006952
Apr3g0940 490 SUPERFAMILY L domain-like 16 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0940 Apr-Chr3 24332784 24334506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0940 12 243 WRKY Transcription Factor Family AT4G12020 34.221 1.09e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0940 - - aprc:113859649 1021.15