Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0938 ATGATTGAAATTATTGTTAAAGACATACTAAAAAAATTGAGTCAGAGTATTTCAATGCTTCCAAATCAAGATTTAGTTGGAATGGAATCTCGTGTTGAAAAGATAGAAGAGCTTCTATGTTTGGACTCAGTTAATGATGTTGGTGTTGTCGGAATTTGCGGGATGCCTGGAATAGGAAAGACGGAACTTGGTCATGCTTTATACAGAAGAATTTCTCATCAGTATGATTTTCGTTGTTATATTGATGATGTAAGCAAAATTTTTCGATACTCTAGTACATTAGGTCTTCAAAAACAGCTACTTCGACAAGTCCTAAATGACCAAAATCTAGATATCTACAATGTTCCTGCAGGAACCGATTTGGTACAGAGAAGGCTGCGCCACACAAGGGCACTTATAATTCTTGATAATGTTGATAATATTGATCAGCTGAATAAATTGGCTTTGAAACCTAATCAGCTATGTGCAGGGACTAGAATTATCATAATTTCTATTGATGAACATATTTTGAGGGCGTATAAAGTGAATCGTGTTTACCGAGTGCAGCCTTTGACTTGGGACAATGCTATTCAATTGTTTTGCAAACATGCTTTCAAAGATAATTATATTATGAGTGAGTTTGAAAAGTTGAAATATGATGTATTATCATATGCTGATGGCCATCCACTAGCAATTAAAGTGTTGGGCTCTTTTTTGTCTGATAAAGATGTGTCGCAGTGGAGACGTGCAATAGCTATGCTAAGAGAAAGTCCAGATGAAGACGTTATGAAGGTGTTACGAATAAGTTTTGATGGGCTGAAGCCAATACAAAAGGAAATATTTCTTGACATTGCTTGTTTTTTCAGGGACGGTCATGAAAAGTACTATGTGGAGGAAGTTCTTAATTTTCGTGGATTTTATCCTGAAATTAACCTAAAAGTTCTCGTCCAAAAGTCACTTATAACCATTAAGAGCGGGTTAATTTATATGCCGACACTGTTGAGCGAATTAGGAAGGTGTATTGTTCGAGAAAAATCACCTAAGAAGCCAAGAAAGTGGAGTAGGTTGTGGGATTACCAAGATTTGAGGAAGGTTATGTTGGACTATAAGGTAAGATAG 1098 0.3597 MIEIIVKDILKKLSQSISMLPNQDLVGMESRVEKIEELLCLDSVNDVGVVGICGMPGIGKTELGHALYRRISHQYDFRCYIDDVSKIFRYSSTLGLQKQLLRQVLNDQNLDIYNVPAGTDLVQRRLRHTRALIILDNVDNIDQLNKLALKPNQLCAGTRIIIISIDEHILRAYKVNRVYRVQPLTWDNAIQLFCKHAFKDNYIMSEFEKLKYDVLSYADGHPLAIKVLGSFLSDKDVSQWRRAIAMLRESPDEDVMKVLRISFDGLKPIQKEIFLDIACFFRDGHEKYYVEEVLNFRGFYPEINLKVLVQKSLITIKSGLIYMPTLLSELGRCIVREKSPKKPRKWSRLWDYQDLRKVMLDYKVR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0938 365 Pfam NB-ARC domain 29 253 IPR002182 GO:0043531
Apr3g0938 365 PRINTS Disease resistance protein signature 49 64 - -
Apr3g0938 365 PRINTS Disease resistance protein signature 125 139 - -
Apr3g0938 365 PRINTS Disease resistance protein signature 218 232 - -
Apr3g0938 365 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 360 IPR044974 GO:0006952
Apr3g0938 365 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 20 360 - -
Apr3g0938 365 Gene3D - 11 179 IPR027417 -
Apr3g0938 365 SUPERFAMILY "Winged helix" DNA-binding domain 254 358 IPR036390 -
Apr3g0938 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 277 IPR027417 -
Apr3g0938 365 Gene3D - 184 267 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0938 Apr-Chr3 24330831 24335019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0938 26 361 WRKY Transcription Factor Family AT5G45050 31.657 5.94e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0938 - - aprc:113858100 729.939