Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0937 ATGGCTTCCAACTCTATCATCCCATACACTGCTTCTTCTTCATCTCAGACTTATGAAGTTTTCGTGAGCTTCAGAGGTGACACTCGCAACAACTTCACTGACCATCTTTTTGGTGCTCTCGGCAGAAAAGGCATTCATTTCTTCAGGGATGATACGAAGCTTAAGAAAGGGAAACTTATATTGCCTGATCTCCTGCAAGCGATTGATGGGTCTCAGATTTTGGTTGTTGTCTTCTCAAAGAAGTATGCTTCCTCAAAATGGTGCTTGCGAGAACTTGAAAAGATTGCCGATTACATTGACGTCTCCGGAAAGCACGTTCTGCCTATTTTTTATCGCGTCAATCCTTCAGAGGTGCGAAATCAGAGTGGGAAATACAAAGAAGCCTTTGGTGAATACGAAAAAAGATTCACAGAAGATGAAGAGAAGAAGGATGAAGTGCAAAGATGGAGAGGAGCTCTGGCACGAGTGGGCAATCTCTCTGGTTGGCACATTACAAATGAGTCACAACATTCAATGATTGAAAATGTTGTTAAAGACATACTAAAAAAATTGAGTCAGGGTATTTCAATTCTTCCAAATCAGGATCTAGTTGGAATGCAATCTCGTGTTGAAGAGATAGAAAAGCTTTTATGTTTAGACTCAGTTAATGATGTTGGTGTTGTCGGAATTTGCGGGATGCCTGGAATAGGAAAGACAACTCTTGCTCGTGCTTTATACAAAACAATCTTTCGTCAGTATGATTTTCATTGTTATATTGACGATGTAAGCAAAAGTTTTCGAGACTTTAGTACATTAGGTCTACAAAAACAGCTACTTCATCAAGTTCTAAATGACCAGAGTCTAGAGATCTACAATGTTTCTGCAGGAACCGATTTAGTACAGAAAAGGCTGTGCCACACAAGGGCACTTATAATTCTTGACAATGTAGATAACATTGATCAGCTATATCAATTGGCTTTGAAACCTAATCAGCTATGTGCAGGGACTAGAATTATCATAATTTCTAGTGATGAACATATTTTGAGGGCGCATAAAGTGAATCGTGTTTACCGAGTCAAGCCTTTGCATTGGGACCATGCTTTTCAATTGTTTTGCAAACATGCTTTCAAAGATAATTATATTATGAGTGAGTATGAAGAGTTGAAATATGATGTATTATCATATGCTGATGGCCATCCCCTAGCAATTAAAGTGTTGGGGTCATTTTTGTTTGGTCAAGATGTCTCGCAGTGGAGACGTGCATTAGCTATGCTAAGAGAAAGTCCAGATGAAGACGTTATGAAGGTGTTACGAATAAGTTTTGATGGGCTGAAGCCAATACAAAAGGAAATATTTCTTGACATTGCTTGTTTTTTCTCGGACGGTTATGAAAAGGACGATGTGGAGGAAATTCTTAATTTTCGTGGATTTTATCCTGAAATTAACCTAAGTGTTCTCGTCCAAAAATCACTTATAACCATTGAGTTGGAACGAATATATATGCCGACATTGTTGAGTGATTTAGGCAAGTGTATTGTTCGAGAAAAATCACCTAAGAAACCAAGAAAGTGGAGTAGGTTGTGGGATTACCAAGATTTGCGGAAACTTATGTTAGACCATAAGGCTGCAGAAAATCTTGAAGTCATACAAGTGTATGGTGATGATGAATTTGATTTTCAAGAAACAACAATCACGGCCGATGCTCTATCAAAAATGCGTCACCTGAAGTTTCTCCAATTTCGTTATGTGAAATTTTCCGGAAGCCTTGATTATCTTTCCAGTGAATTAGGATATATGAATTGGTCGGAATATCCTTTTGATTATTTGCCGGCAAATTTTCAGCCAGACAACCTTGTTGAGTTGATGCTGAGTTGGAGTAACATTAAGCAATTGTGGAAAGACACAAAGCCTCTACCCAATTTGAGACGTTTGGACCTCTCCCACTCCCAAAGTCTTATGGAGTTACCACATTTTGGAGAGGCCCCTAATCTTGAGTGGCTAGATCTCAACGGATGTATACAACTCAGGCAGATCGATGCATCTATTGGTCTTCTAAGAAAGCTCACTATATTGAATTTGACAGATTGTGAAAATCTCGTAAGTGTGCCCAGCAGCATATGTGGCCTCAATTCTCTTGAATATCTGGGTCTCTCTGGTTGTTCAAAAGTGTGTAAGTTTTTAGACGAACCAAGGTATGGAGAGCATTTGAAGAAGCTTTTTATAGGTGAAGCTCCTATTCATTCCCAATCAGCATCCTCCATTGGGAATCTACTTCAAGAAGCTTTGTATAATATCTCACATATGCGTCAACTTGATCTAAGTTGCTGCAGTTTACTTCAAATCCCTGATACTGTTGGAAATTTACATTACTTAGAATGGCTAAATTTAAGTAGAAACAAATTTGGTACACTACCGAGCCTGAAGGAGCTTTCCAAACTGTATTATATAAACTTGGAGCATTGCAAGCAATTGAAATGTTTGCCTCAGCTACCTTCAAGAACTGACTCATCAATAACTTGCCTGTCAGAGTCACCAATTCTATCTGACGACGGAAGAGCAGGAATAAACATTTTCGACTGCCCAGAATTAGTTGACAGGGAACGGTGCAATAGGATGTGTTTTTCATGGATGATGGAAATCGTTAAGGTGTGA 2631 0.3888 MASNSIIPYTASSSSQTYEVFVSFRGDTRNNFTDHLFGALGRKGIHFFRDDTKLKKGKLILPDLLQAIDGSQILVVVFSKKYASSKWCLRELEKIADYIDVSGKHVLPIFYRVNPSEVRNQSGKYKEAFGEYEKRFTEDEEKKDEVQRWRGALARVGNLSGWHITNESQHSMIENVVKDILKKLSQGISILPNQDLVGMQSRVEEIEKLLCLDSVNDVGVVGICGMPGIGKTTLARALYKTIFRQYDFHCYIDDVSKSFRDFSTLGLQKQLLHQVLNDQSLEIYNVSAGTDLVQKRLCHTRALIILDNVDNIDQLYQLALKPNQLCAGTRIIIISSDEHILRAHKVNRVYRVKPLHWDHAFQLFCKHAFKDNYIMSEYEELKYDVLSYADGHPLAIKVLGSFLFGQDVSQWRRALAMLRESPDEDVMKVLRISFDGLKPIQKEIFLDIACFFSDGYEKDDVEEILNFRGFYPEINLSVLVQKSLITIELERIYMPTLLSDLGKCIVREKSPKKPRKWSRLWDYQDLRKLMLDHKAAENLEVIQVYGDDEFDFQETTITADALSKMRHLKFLQFRYVKFSGSLDYLSSELGYMNWSEYPFDYLPANFQPDNLVELMLSWSNIKQLWKDTKPLPNLRRLDLSHSQSLMELPHFGEAPNLEWLDLNGCIQLRQIDASIGLLRKLTILNLTDCENLVSVPSSICGLNSLEYLGLSGCSKVCKFLDEPRYGEHLKKLFIGEAPIHSQSASSIGNLLQEALYNISHMRQLDLSCCSLLQIPDTVGNLHYLEWLNLSRNKFGTLPSLKELSKLYYINLEHCKQLKCLPQLPSRTDSSITCLSESPILSDDGRAGINIFDCPELVDRERCNRMCFSWMMEIVKV* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0937 876 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Apr3g0937 876 Gene3D Ribonuclease Inhibitor 518 737 IPR032675 -
Apr3g0937 876 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Apr3g0937 876 SMART AAA_5 217 355 IPR003593 -
Apr3g0937 876 Pfam Leucine rich repeat 760 815 IPR001611 GO:0005515
Apr3g0937 876 Gene3D Ribonuclease Inhibitor 741 842 IPR032675 -
Apr3g0937 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 448 IPR027417 -
Apr3g0937 876 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Apr3g0937 876 SUPERFAMILY "Winged helix" DNA-binding domain 425 528 IPR036390 -
Apr3g0937 876 Gene3D - 355 438 IPR042197 -
Apr3g0937 876 SMART till_3 17 159 IPR000157 GO:0007165
Apr3g0937 876 Pfam TIR domain 18 189 IPR000157 GO:0007165
Apr3g0937 876 Gene3D - 10 182 IPR035897 -
Apr3g0937 876 ProSiteProfiles Leucine-rich repeat profile. 783 804 IPR001611 GO:0005515
Apr3g0937 876 SUPERFAMILY L domain-like 555 822 - -
Apr3g0937 876 PRINTS Disease resistance protein signature 220 235 - -
Apr3g0937 876 PRINTS Disease resistance protein signature 296 310 - -
Apr3g0937 876 PRINTS Disease resistance protein signature 389 403 - -
Apr3g0937 876 PRINTS Disease resistance protein signature 629 645 - -
Apr3g0937 876 Gene3D - 183 350 IPR027417 -
Apr3g0937 876 CDD AAA 197 253 - -
Apr3g0937 876 PANTHER TMV RESISTANCE PROTEIN N-LIKE 23 750 - -
Apr3g0937 876 PANTHER TMV RESISTANCE PROTEIN N-LIKE 764 835 - -
Apr3g0937 876 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 764 835 IPR044974 GO:0006952
Apr3g0937 876 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 750 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0937 Apr-Chr3 24315320 24323335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0937 8 810 WRKY Transcription Factor Family AT4G12020 30.012 1.75e-93 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0937 - - aprc:113858098 1773.06