Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0936 ATGGCTTCCAACTCTATCATCCCATACACTTCTTCTTCTTCATCATCTCATGAAGTTTTCGTGAGCTTCAGAGGTGACATTCGCAACAACTTCGCTGACCATCTTTTTGGTGGTCTTGGTAGAAAAGGCATTCGTTTCTTCAGGGATGACTCAAAGCTTGAGAAAGGGAAACTTATATTACCTGAACTCCTGCAAGCGATTGATGGGTCTCACATTTTGGTTGTTGTCTTCTCAGAGGAGTATGCTTCCTCAAAATGGTGCTTGCGAGAACTTGAAAGGATTGCCGATTACGTTGATGACCGAGGCAAGCACGTTCTGCCGGTTTTTTATAGAGTTGATCCATCAGACGTGCGAAAACAGAGTGGGCAATACAAAAAAGCCTTTGATGAATACAAACAAATATTCAAAGAAGATGAAGAGAAGATGGAGGAAGTGCAAAGATGGAGAGAAGCTCTGGCACGAGTGGGCAATCTCTCTGGTTGGCACATTACAAATGAGTCAGAACATTCAATGATTGAAATTATTGTTAAAGACATACTAAAAAAATTGAGTCAGAGTATTTCAATTCTTCCAAATCAAGATTTAGTTGGAATGGAATCTCGTGTTGAAGAAATAGAAAAGCTTCTATGTTTGGACTCAGTTAATGATGTTGGTGTTGTCGGAATTTGCGGGATGCCTGGAATAGGAAAGACAACTCTTGGCCGTGCTTTATACAAAACAATCTTTCGTCAATATGATTTTCATTGTTATATTGATGATGTAAGCAAAATTTTTCGAGACTTTAGTACGTTAGGTCTACTAAAACAGCTACTTCGTCAAATTCTAAATGACCGAAGTCTAGAGATCTACAATGTTTCTGCTGGAACCGATTTGGTACAGAGAAGGCTGCGCCACGCAAGGGCACTTATAATTCTTGACAATGTTGATAATATTGATCAGCTATATCAATTGGCTTTGAAACCTAATCAGCTATGTGCAGGGACTAGAATTATCATAATTTCTAGTGATGAACATATTTTGAGGGCGTACAAAGTGAATCGTGTTTACCGAGTCCAGCCTTTGACTCGGGACAACGCTATTCAATTGTTTTGCAAATATGCTTTCGAAGATAATTATATTATGAGTATGTTTGAAGAGTTGAAATATGATGTATTATCATATGCTGATGGCCATCCACTAGCAATTAAAGTGTTGGGCTCATTTTTGTTTGGTCAAGATGTCTCGCAGTGGAGACGTGCATTAGCTATGCTAAGAGAAAGTCCAGATGAAGACGTTATGAAGGTGTTAAGAATAAGTTTTGATGGGCTGAAGCCAATACAAAAGGAAATATTTCTTGACATTGCTTGTTTTTTCAGTGACGACTTTGAAAAGGACTATGTGGAGGAAGTTCTTAATTTTCGTGGATATTATCCTGAAATTAACCTAAGTGTTCTCGTCCAAAAATCACTTATAACCATTGAGGAGGGGCGAATATATATGCCGACATTGTTGAGTGATTTAGGCAGGTGTATTGTTCGAGAAAAATCACCTAAGAAGCCAAGAAAGTGGAGTAGGTTGTGGGATTACCAAGATTTACGGAAAGTTATGTTAGACCATAAGGCAGCAAAAAATCTTGAAGCCATAGAAGTGTATGGTGATGATGAATTTGATTATCAAGAAACAACAATCACGGCCGATGCTCTATCAAAAATGCGTCACCTTAAGTTGCTTGAATTTCGTAATGTGAATTTTTCCGGAAGGCTTGATTTTCTTTCCAATGAATTAGGATATCTTACTTGGTGGAAATATCCTTTTGATTATTTGCCATCAAATTTTCAGCCAGACAACCTTGTTGAGTTGATCCTGAGAGACAGTAACATTAAGCAATTATGGAAAGACACAAAGCCTCTACCCAATTTGAGACGTTTGGATCTCTCCTACTCCCAAAGTCTTATCGAGTTACCACATTTTGGAGAGGCCCCAAAACTTGAGTGGCTAAATCTTGAAGGATGTACCCAACTCAGTGAGATCCAGGCGTCTATTGGTCTTCTAAGAAGGCTCACTTTTTTGAATTTGAGAAATTGTACAAATCTTGTCAGCGTACACTGCAGCATATGGGGCCTCAATACTCTTGAATATCTGACTCTCTCTTGTTGTTCAAAACTGTGTAAGCTATTAGATGAACCAAGGGATGGAGAGCATTTGAAGAAACGTTGTATAGGTGAAGCGCCTGTTCATTCCCAATCAGCATCCTCCATTGGGAATCTACTTCAAGAAGCTTTGTATAGTATCTCATGTTTGCGTCAACTTGATCTCAGTTGCTGCAGTTTACTTCAAATCCCTGTTACTGTTGGAAATTTACATTGCTTAGAATGGCTAAATTTAAGGGGAAACAAATTTGGTACACTACCGAGCCTGAAGGAGCTTTCCAGACTGTATTATATAAACTTGGAGCATTGCAAGCAGTTGAAATGTTTGCCTGAGCTACCTTCACGAACTCACTTCTCTTCACAAACTTTCCGGTCTCCATTTCCAAAAAGTGTCCTTCTAGAACACAAAGAAGTAGCAGTGTTAAACATTTTCGACTGCCCAGAGTTAGCAGACAGGGAACGGTGCAATAGGATGTGTTTTTCATGGATGATGCAAATTGTTAAGGCTATCCATCAATACCAATACAATCCCCTTACAGGTTGGTTGGATCCTTGTGTTGAAAGTGTTATTCCAGGAAGCGAAATACCAAGGTGGTTCAACAATCAGAATGTGGGCATGGGCAATTTAATGAGCATAGACACACCTCCCCTTATTCAGCATGACAATAATTGTATTGGCATTGCGTGTTGTGTAATATTCAGGTTTCATGACGAAAATATTACTTGGGAGGAGCTTCCTCCAAGAACAGGACCACCACATACTGTGCCTATTGAAATTCCGGTGGATCTTTTCAATGAAGAATATATGAGCACATCAGATCACATCTGGCTATTCTATTTCACTCGACAACAATTAAATTTTCTACGTGATAGTTGGCACATGGCTGATCGTGCTGACTTCAAATTCATATTCAAATTTGAAATACTACAAACCCAATTATTTAAGGCTAAGGTGAAGGAATATGGATATCGTTGGGTGTACGAGGAGGATGTAAAACTTTCAAACGTCACAACGATGCACAGCGGAAATTTGTTGCCTCAGAAGCGCAAGCTTTTGGCAATTGAAGAAAATAAGTAG 3207 0.3907 MASNSIIPYTSSSSSSHEVFVSFRGDIRNNFADHLFGGLGRKGIRFFRDDSKLEKGKLILPELLQAIDGSHILVVVFSEEYASSKWCLRELERIADYVDDRGKHVLPVFYRVDPSDVRKQSGQYKKAFDEYKQIFKEDEEKMEEVQRWREALARVGNLSGWHITNESEHSMIEIIVKDILKKLSQSISILPNQDLVGMESRVEEIEKLLCLDSVNDVGVVGICGMPGIGKTTLGRALYKTIFRQYDFHCYIDDVSKIFRDFSTLGLLKQLLRQILNDRSLEIYNVSAGTDLVQRRLRHARALIILDNVDNIDQLYQLALKPNQLCAGTRIIIISSDEHILRAYKVNRVYRVQPLTRDNAIQLFCKYAFEDNYIMSMFEELKYDVLSYADGHPLAIKVLGSFLFGQDVSQWRRALAMLRESPDEDVMKVLRISFDGLKPIQKEIFLDIACFFSDDFEKDYVEEVLNFRGYYPEINLSVLVQKSLITIEEGRIYMPTLLSDLGRCIVREKSPKKPRKWSRLWDYQDLRKVMLDHKAAKNLEAIEVYGDDEFDYQETTITADALSKMRHLKLLEFRNVNFSGRLDFLSNELGYLTWWKYPFDYLPSNFQPDNLVELILRDSNIKQLWKDTKPLPNLRRLDLSYSQSLIELPHFGEAPKLEWLNLEGCTQLSEIQASIGLLRRLTFLNLRNCTNLVSVHCSIWGLNTLEYLTLSCCSKLCKLLDEPRDGEHLKKRCIGEAPVHSQSASSIGNLLQEALYSISCLRQLDLSCCSLLQIPVTVGNLHCLEWLNLRGNKFGTLPSLKELSRLYYINLEHCKQLKCLPELPSRTHFSSQTFRSPFPKSVLLEHKEVAVLNIFDCPELADRERCNRMCFSWMMQIVKAIHQYQYNPLTGWLDPCVESVIPGSEIPRWFNNQNVGMGNLMSIDTPPLIQHDNNCIGIACCVIFRFHDENITWEELPPRTGPPHTVPIEIPVDLFNEEYMSTSDHIWLFYFTRQQLNFLRDSWHMADRADFKFIFKFEILQTQLFKAKVKEYGYRWVYEEDVKLSNVTTMHSGNLLPQKRKLLAIEENK* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0936 1068 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 161 IPR035897 -
Apr3g0936 1068 CDD AAA 196 336 - -
Apr3g0936 1068 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Apr3g0936 1068 Gene3D Ribonuclease Inhibitor 742 873 IPR032675 -
Apr3g0936 1068 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Apr3g0936 1068 Gene3D - 186 349 IPR027417 -
Apr3g0936 1068 SUPERFAMILY L domain-like 553 827 - -
Apr3g0936 1068 Gene3D - 10 185 IPR035897 -
Apr3g0936 1068 SUPERFAMILY "Winged helix" DNA-binding domain 424 528 IPR036390 -
Apr3g0936 1068 PRINTS Disease resistance protein signature 219 234 - -
Apr3g0936 1068 PRINTS Disease resistance protein signature 295 309 - -
Apr3g0936 1068 PRINTS Disease resistance protein signature 388 402 - -
Apr3g0936 1068 PRINTS Disease resistance protein signature 628 644 - -
Apr3g0936 1068 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 760 1048 - -
Apr3g0936 1068 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 191 738 - -
Apr3g0936 1068 ProSiteProfiles Leucine-rich repeat profile. 782 803 IPR001611 GO:0005515
Apr3g0936 1068 Gene3D - 354 437 IPR042197 -
Apr3g0936 1068 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 191 738 IPR044974 GO:0006952
Apr3g0936 1068 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 760 1048 IPR044974 GO:0006952
Apr3g0936 1068 SMART AAA_5 216 354 IPR003593 -
Apr3g0936 1068 Gene3D Ribonuclease Inhibitor 535 741 IPR032675 -
Apr3g0936 1068 Pfam C-JID domain 900 1041 IPR045344 -
Apr3g0936 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 447 IPR027417 -
Apr3g0936 1068 Pfam TIR domain 17 189 IPR000157 GO:0007165
Apr3g0936 1068 Pfam NB-ARC domain 200 423 IPR002182 GO:0043531
Apr3g0936 1068 SMART till_3 16 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0936 Apr-Chr3 24302868 24307308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0936 8 809 WRKY Transcription Factor Family AT4G12020 29.028 6.18e-82 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0936 - - aprc:113858097 2126.67