Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0935 ATGACAGTGGTTTTGCTTTTGTATTTTTTTGATGCGTGTTATCGTAGTAATTCAGCTAACCTGTTGATTGAAAATTCAGGTCTGAGCAATCTGGTTTTTGGAATCTTCTGTCTTGGAGAGTTAAGTTTTATGTCTGAATTAGACGCTCAGATTCCTACTGCCTTCGATCCTTTTGCTGAGGCAAATGCTGACGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTACAGCAGCGAAATGGTAGGAAAAGCCTGACAACTGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGACCTTAAGAAAGAGTTCTGTTGTAATGGTACGGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTTTCTACCTTCCTAGTCCAGGCTGGCATTGTGAAGAAGGAACATATCAAGATTCATGGTTTCTGA 471 0.4098 MTVVLLLYFFDACYRSNSANLLIENSGLSNLVFGIFCLGELSFMSELDAQIPTAFDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0935 156 Gene3D - 41 156 - -
Apr3g0935 156 CDD eIF1_SUI1 72 155 IPR005874 GO:0003743
Apr3g0935 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 44 156 - -
Apr3g0935 156 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 49 156 IPR005874 GO:0003743
Apr3g0935 156 Pfam Translation initiation factor SUI1 71 145 IPR001950 GO:0003743|GO:0006413
Apr3g0935 156 SUPERFAMILY eIF1-like 42 156 IPR036877 GO:0003743|GO:0006413
Apr3g0935 156 ProSiteProfiles Translation initiation factor SUI1 family profile. 74 144 IPR001950 GO:0003743|GO:0006413
Apr3g0935 156 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG ISOFORM X1 44 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0935 Apr-Chr3 24299256 24302527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0935 44 156 Eukaryotic Initiation Factors Gene Family AT4G27130 90.265 5.63e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0935 K03113 - jre:108993512 226.098