Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0929 ATGGCTTCCAACTCTATCATCCCATACACTTCTTCTTCTTCATCATCTCATACTTATGAAGTTTTCGTGAGCTTCAGAGGTGACATTCGCAACAACTTTGCTGACCATCTTTTTGGTGGTCTTGGTAGAAAAGGCATTCGTTTCTTCAGGGATGACTCAAAGCTTGAGAAAGGGAAACTTATATTACCTGAACTCCTGCAAGCGATTGATGGGTCTCACATTTTGGTTGTTGTCTTCTCAGAGGAGTATGCTTCCTCAAAATGGTGCTTGCGAGAACTTGAAAGGATTGCCGATTACGTTGATGACCGAGGCAAGCACGTTCTGCCGGTTTTTTATAGAGTTGATCCATCAGACGTGCGAAAACAGAGTGGGCAATACAAAAAAGCCTTTGATGAATACAAACAAATATTCAAAGAAGATGAAGAGAAGATGGAGGAAGTGCAAAGATGGAGAGAAGCTCTGGCACGAGTGGGCAATCTCTCTGGTTGGCACATTACAAATGAGTCAGAACATTCAATGATTGAAATTATTGTTAAAGACATACTAACAAAATTGAGTCACAGTATTTCAATTCTTCCAAATCAAGATTTAGTTGGAATGGAATCTCGTGTTGAAGAGATAGAAAAGCTTCTATGTTTGGACTCAATTAATGATGTTGGTGTTGTCGGAATTTGCGGGATGCCTGGAATAGGAAAGACAACTCTTGGTCGTGCTTTATACAAAACAATCTTTCGTCAATATGATTTTCATTGTTATATTGATGATGTAAGCAAAAATTTTCGAGACTTTAGTACATTAGGTCTACTAAAACAGCTACTTCGTCAAATTCTAAATGACCGAAGTCTAGAGATCTACAATGTTTCTGCTGGAACCGATTTGGTACAGAGAAGGCTGCGCCACGCAAGGGCACTTATAATTCTTGACAATGTTGATAATATTGATCAGCTATATCAATTGGCTTTGAAACCTAATCAGCTATGTGCAGGGACTAGAATTATCATTAATTTCTAG 1011 0.3867 MASNSIIPYTSSSSSSHTYEVFVSFRGDIRNNFADHLFGGLGRKGIRFFRDDSKLEKGKLILPELLQAIDGSHILVVVFSEEYASSKWCLRELERIADYVDDRGKHVLPVFYRVDPSDVRKQSGQYKKAFDEYKQIFKEDEEKMEEVQRWREALARVGNLSGWHITNESEHSMIEIIVKDILTKLSHSISILPNQDLVGMESRVEEIEKLLCLDSINDVGVVGICGMPGIGKTTLGRALYKTIFRQYDFHCYIDDVSKNFRDFSTLGLLKQLLRQILNDRSLEIYNVSAGTDLVQRRLRHARALIILDNVDNIDQLYQLALKPNQLCAGTRIIINF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0929 336 Pfam NB-ARC domain 202 313 IPR002182 GO:0043531
Apr3g0929 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 334 IPR027417 -
Apr3g0929 336 Gene3D - 12 186 IPR035897 -
Apr3g0929 336 PRINTS Disease resistance protein signature 221 236 - -
Apr3g0929 336 PRINTS Disease resistance protein signature 297 311 - -
Apr3g0929 336 Gene3D - 187 335 IPR027417 -
Apr3g0929 336 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 163 IPR035897 -
Apr3g0929 336 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 13 205 - -
Apr3g0929 336 CDD AAA 198 254 - -
Apr3g0929 336 SMART till_3 18 160 IPR000157 GO:0007165
Apr3g0929 336 ProSiteProfiles TIR domain profile. 17 185 IPR000157 GO:0007165
Apr3g0929 336 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 205 - -
Apr3g0929 336 Pfam TIR domain 19 191 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0929 Apr-Chr3 24252102 24253237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0929 14 335 WRKY Transcription Factor Family AT4G12020 28.086 6.89e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0929 - - aprc:113859644 635.95