Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0923 ATGGATCACCAAAATGAGCAAAATCAAAGTATGCGTTTGGTTTTGTCCACTGATGCCAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAAAGGTTCACTGAGGCTATTAATCAACTTGGAGGTGCAGAAAAGGCAACTCCAAAGAGTCTTATGAGAGTGATGGGGATTCCTAGACTCACTTTGTACCACCTCAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAGCCAGAAACCTGCTCTGACATCAAACAACAAGGTTACATAGAAATCCAAAACAGTGATGGTCATTGCAGCAAGGAAATCACAACTGGAACCCAGAATGAGATGACTGAAAGCATGAAGATTGCTCAAGCTCTCCAAATGCAAATGGAAGTACAAAGGAAACTTTATGAACAAATCGAGGTCCAGAGACAGTTGCAGCTTAGAATCGAGGCTCAAGGGAAGTACCTACAATCGGTACTAACAAAGGCACAGGAAGCCCTTGCAAGTTACAGTTCTTCTTCCACAGTAGGTGCAGAACTTGCAAAAGTTGAACTTTCTCAGTTAGTTTCAATAATCAACAATGCATGCCCAAGTTCTCCAATTTCAGAACTCACAGAAACAAGAGGGCTCAGTTTGAACAATGGAGAGAGGAAACAAGACAGAGGAACCATGTGTTCACTGGAAAGTTCTTTGACATCATCTGAAAGCTCTGGGAGAAAAGAAGAGAAACAACCAATGGATGAGGCAGAGGACACTCAAATGTCTGATAGTGTTTCCGTTGAATTGCCATTAATGGCCGAATACCCACAAGATAAAGCATCCAAGGGAGATACAAGTGATGGAAGTAGTAGGAGAAAGAGAAGTGAAGCACTAGATTCTGATGGTAGCAGCATTGATCGAGCATGTGGAAAAAGATGTGGCAACAAGTTGAGGAAATCTGAGTTGTCAGAAATGCTTGACTTGAATAGCCAATGTCATAGAGACATGGACTCAAATGTGAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGGAAATGA 1038 0.4181 MDHQNEQNQSMRLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPRLTLYHLKSHLQKYRLGKSQQPETCSDIKQQGYIEIQNSDGHCSKEITTGTQNEMTESMKIAQALQMQMEVQRKLYEQIEVQRQLQLRIEAQGKYLQSVLTKAQEALASYSSSSTVGAELAKVELSQLVSIINNACPSSPISELTETRGLSLNNGERKQDRGTMCSLESSLTSSESSGRKEEKQPMDEAEDTQMSDSVSVELPLMAEYPQDKASKGDTSDGSSRRKRSEALDSDGSSIDRACGKRCGNKLRKSELSEMLDLNSQCHRDMDSNVKEIDLNCSSSFWGK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0923 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 342 IPR044848 GO:0003700
Apr3g0923 345 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Apr3g0923 345 MobiDBLite consensus disorder prediction 271 292 - -
Apr3g0923 345 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 342 - -
Apr3g0923 345 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Apr3g0923 345 MobiDBLite consensus disorder prediction 205 301 - -
Apr3g0923 345 MobiDBLite consensus disorder prediction 233 248 - -
Apr3g0923 345 MobiDBLite consensus disorder prediction 205 232 - -
Apr3g0923 345 Gene3D - 19 77 - -
Apr3g0923 345 Coils Coil 120 140 - -
Apr3g0923 345 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Apr3g0923 345 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0923 Apr-Chr3 23998013 23999967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0923 11 205 G2-like Transcription Factor Family AT1G69580 58.128 1.42e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr3g0923 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0923 - - gmx:100805252 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0923 3 23998013 23999967 Apr3g0923 3 23998013 23999967 ECH