Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0920 ATGGAGAGCCAAAGACAACTCCCTGTGTCAAACTTGGGCCTACCCAGGAAAGGAACCACCTTCTTCAAAACATGTTTCAATGGACTCAACGCCGTGGCAGGTATTGGGGTACTATCAATGCCGTATGCAGTTTCTCAAGGAGGGTGGCTGGGTTTTATGATATTATTTCTTTTTGCTATGATATGTTGGTACACAGCGCTACTTCTAATAAGGTGTATGAATAATAATCCACTAATCAAATCCTACCCTGACATAGCTGAGGTTGCTTTTGGGAACAGAGGAAGAGCTTTTATATCAGTTCTCATGTACGTAGAGCTGTTTTTAATTGCAGTGGAGCTTCTGATATTGGAAGGTGACAATCTGGAGAAGTTGTTTCCAAACATGAACTTCAAAATTAATGGTCTTAGAATCGAAGGTAAAAGGGGTTTTGTCCTGTTAGCATCTCTGGTCATACTACCAACAACGTGGTTGAGAAGTCTGGGAGCACTGGCCTACGTTTCTTTTGGAGGGGTATTGGCTTCGTCTATTTTAATTGGTTGTGTTATGTGGGTGGGTGAATTTGATGGCGTGGGGTTTCATGAAAGAGGCCACTTAGTGAATTGGGTTGGCTTGCCTACCTCGATTAGCCTTTTTGCCTTCTGTTACTGTGCGCATGCAATGATGCCCACACTTTGCAACTCTATGAGTGACAGAAGTCAGTTTCCAAAGGTTTTAATGATTTGTTTTGTGGCAAGCACCTTTATCTATGGATTCATTGGTATGTTAGGCTACAGAATGTTCGGCGATGGTTTGAAGTCTCAAATCACTTTAAATCTACCCACACAAAAAATGAGTACTAAAATAGCAATTGTTACCACAGTAATCAATCCTTTCACCAAGTATGCTGTTCTAATCACCCCAATAGCAGATGCTATTGAGGACAAATGGCTTCTCTGCAAAAAAAGGCCTATTGCCATTCTCATTAGAACAAGCATCGTGCTCGGCACTGTGCTTATGGCGCTATTCATGCCATTCTTTGCGTACATTATGGCTTTTATTGGTGCATTCATGAGTGTGACAATCTCACTTTTGTTCCCTTGTCTTTGCCACCTAAAGATAAACAAAGCTTCACGGCGATTTGGGTTGGAATTGATCTTAATCATGGGAATTCTGATCATAGGTACATTCATGGGAATATTGGGTACCTACCTCTCTGTGAAGCAAATTGTGACTAATCTATAG 1221 0.4136 MESQRQLPVSNLGLPRKGTTFFKTCFNGLNAVAGIGVLSMPYAVSQGGWLGFMILFLFAMICWYTALLLIRCMNNNPLIKSYPDIAEVAFGNRGRAFISVLMYVELFLIAVELLILEGDNLEKLFPNMNFKINGLRIEGKRGFVLLASLVILPTTWLRSLGALAYVSFGGVLASSILIGCVMWVGEFDGVGFHERGHLVNWVGLPTSISLFAFCYCAHAMMPTLCNSMSDRSQFPKVLMICFVASTFIYGFIGMLGYRMFGDGLKSQITLNLPTQKMSTKIAIVTTVINPFTKYAVLITPIADAIEDKWLLCKKRPIAILIRTSIVLGTVLMALFMPFFAYIMAFIGAFMSVTISLLFPCLCHLKINKASRRFGLELILIMGILIIGTFMGILGTYLSVKQIVTNL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0920 406 Pfam Transmembrane amino acid transporter protein 18 396 IPR013057 -
Apr3g0920 406 PANTHER OS06G0228500 PROTEIN 15 404 - -
Apr3g0920 406 PANTHER OS05G0424000 PROTEIN-RELATED 15 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0920 Apr-Chr3 23917095 23919329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0920 2 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.420 1.90e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0920 K15015 - gmx:100812006 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0920 3 23917095 23919329 Apr3g0920 3 23917095 23919329 ECH