Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0913 ATGATACAGCGAATGAGTTCCTCTTCTTCCAATCATGGCTGGGCTTTTGATGTCTTCCTCAGTTTTAGAGGCAATGACACTCGAAGTGGCTTCACTGGCAACCTTTATAAATCTCTTTGTGACAGGGGAATCAAAACCTTCCTAGATGATGAGGAGGTTACAAGGGGGGAAGAGATTAGGCCAGCTCTTTTTAAGGCAATTGAGCAATCTAGAATTGCCATTGTTGTTTTCTCTAAAAACTATGCTTCCTCAACTTATTGTCTTGAAGAACTTGTCATAATCCTTGAGTGCATAATGAAAAAGGGTCGATTGGTTTGGCCAATTTTTTACGGAGTGAGTCCATCTTATGTGAGGCATCAAAAAGGTTCTTATGGAAAAGCATTCGCTAAGCTTGAAGAAAGATTCAAGAATGACAAGGAGAGGGTGCAAAAGTGGAAGCTAGCCCTCCAAGAAGCGGCTAATTTATCTGGTTGGGATTTCAAAACCAAACATGGGTATGAATATAAATTTATTCAGACGATTGTTGAAGGGGTGTCCAAAAAGATAAAATGTAGCCCTTTACATGTAGCTAATTATCCAGTTGGATTGGACTCTAGAGTACAAGAGGTAAACTCACTTTTGAATGTTGGATCCAATCAAGGAGTAAGCATTGTAGGGATTTATGGAGTTGGGGGAATAGGTAAAACCACAATCGCATGTGCAGTGTATAATTTCATTGCTGATCATTTTGAAGGTCAGTGTTTTCTTGCTGACATTAGAGAAAATTCAATGAAGTATGGCTTGGTACATCTTCAGGAGACAATACTTTCTGAAATAGTTGGGGAGAAGAGTATCAAGTTGGGGAGCATTAATAGGGGAATGGCAGTGTTGAAAAGCAAGCTTCAACGAAAGAAAGTTCTTTTGATCCTTGATGACGTTGATAAATTGGAGCATTTAAATGCGCTTGCTGGAGATCTTTCTTGGTTTGGTTACGGCAGCAAAATCATTATCACAACAAGGAATAAGCATTTGCTACACATACATGGTGTTGAAAGAACATACGAGGCAGAAGGATTAGATTACAAAGAAGCCCTTGAGTTGTTTAGTTGGCATGCTTTTAAAAACAATGAGGTAGGTTCAAGTTACACGGATATCTCAAAGCGTGCAATACTTTATTCCAATGGCCTTCCTTTGGCTTTGGAAATTTTAGGTTCTAACTTATATGGTAAAACATTGTCTGAATGGAAAGCAGCATTAGATACCTATGAAAGAATTCCAGATGAAGATATTCAGAAAAAACTAGAAATAAGCTATGATGGTTTGAAAAGAAATGAGAAGGAAGTTTTCCTTGACATGGCTTGTTTCTTTAGAGGTTACAATTTAAAAGATGCCATAAGTCTATTGCTCCAGGGTCGTGGTTTCTCACCAGAATATGTTATTCGAGTGTTGATTGATAAATCTCTCATAAAGATCGATCAGTATGGTTTTGTAAGAATGCATAACTTGGTAGTGGACATGGGTCGAGAAATTGTTCGGCAGGAATCACGGTCAGAACCTGGCAAACGAAGTAGATTATGGTTTTATGAGGATATTGTTGAAGTTTTAGAAAATGACAAGGGAACTGATGCAATTGAAGTGATCATGCTACGCTTCCCAAAGAACAAGGAAGTTTGGTGGAATGGAAGTGAGCTCAAGAAGATGACAAACCTCAAAATACTAACTATTGAAAATGCTTGCTTTTCTAGAGGCCCTGAACATCTCCCAAGTAGTTTAAGAGTATTAAAATGGTGGGAATATCCTTCACCATCTCTGCCACCTGAATTTGATCCAAGGAGACTTGTTACGTTAGACTTATCATTCAGTTGCAAAATATTGGGACAACAACTCCAACTCATGAAGTTCAAGTCATTGACTGAAATGGTTTTAAGGGGGAGCAAAATCACACGTGTACCTGATATGTCTGGAGCCCAAAATTTAAGGAAACTGTGTCTTGATAACTGCAAGAATTTAGTAGAAGTTGATGATTCCATTGGGTTTCTTGATAAACTTACATGGTTCACTGCTATTGGATGCACCAATCTAAAGATTCTTCCCCACAGCTTCAAGTTAACATCACTTGAATATCTGTCTCTCAGAAAATGCTCAACTCTCCGCCTTTTGCCAAAAGTATTAGAAGAAATGAAACACGTAAAAAATATTGATCTGTGTGGAACTGCTATAGAAGAATTGCCATTTTCGTTTAGGAATCTCACTGGGCTTAAGTATTTAGTGCTGGATAAATGCAAGATGCTTAATCAGATCCCAATTACTATTTTGGTGTTACCAAAACTTGAGAGATTGACAGCTGTAAAATGTGGACGCTATGTAAATTTGGTCCTTGGTAAAAGTGAAAAACAAAAAGGATTGGGATCATCAGAATCTTTCAAGGATATTACATTAAACTACCATGATTTGACACCTGGCTGCTTCCCCAATATAGAATTCCTAGTCCTAACTGGCACTGCTTTCAAAGTCCTTCCTGAATACATCAGTCAATGTAACTTTCTGAAGAATCTAGTTTTGGACAATTGCAAGGAGCTTCAAGAAATCAGAGGGGTTCCCCCAAAGATAAAATATCTCTCGGCAATAAACTGTACATCATTGACTCATGAGTCTCGAAGCTTGTTATTGAATCAGAGATTACATGAGGGTGGGGGAACAGATTTTTCCCTTCCAGGAATAATGATACCAGAATGGTTCGACCATTGTACTATGGGACCATCCCTGTCTTTCTGGTTTCGCAACAAATTTCCAAGGATAGCCCTAGCTGCTGTTGGAGTTTTGGACAGGCAAGGCAGTTTTCCCAAGTCAGTATTCCACTTGCTTATTAATGGCATTCAAAACCTGCATTGCCATTTTACTGCACAGTCAAAACTAGTCACGTATCATATATTTTTGTCTGATGTACTGTTCAAATCCTACAATGGTGAATTAGAAAGTGTATATAGGGATGATGGGTGGAATCATGTTGAGGTTTCATACGTGGGACCAAGTATGAGGGCTTTCCCGCCCACCCACAGAGCCAAGAAAGGAATCATAAAATGGATGGGAATTCATGTTTACAAGCAAAAAACAAGCATGGAGGATGTCCGGTTCACAAATCCAAAGTCTCCGAAGAGATTATATGACGAATTTTCCAAGCTAGATTTGAACCAAAATTTTCGACCTTCGCCCAAAAGAAGTCGTGGATCACAAGGCATGGAAATTTGCGAGTCACCACATATAGACCACCATCAAGCTAATAATAGTTATCAGGGTGTATCAGAAAGACTATGGTTGGCAATTTACAGCATTATAGCTCCTCTAGAAGTTAAACTCCTAATGTTCAGCATTTGCCAAAATGCCTTGCCAACATATGAATATCTGTTCAAGAGGAAGCTTGTAGATAGCCCAGTGTGTCCCATTTGTGAAACAGAACCTGAAACTCTTGAGCATGTATTCCTGTTTTGCCCATGGACACGACCCCTTTGGTTTGGAAGTGATTTCCAGTGGTGCATTGATGTCAATTCAGTTCAAAGCTTTCAACTTTGGCTTTACAAGAAACTCGAGGAGATTAAAAGGGTATATCCAGAAAATGCGAACCAAATCTCTGGTCTGGTGGTATATATTTGTTGGGCTATTTGGAAGGGAAGGAATGAATTTGTTCTTGAAGGCAAACATGTCAATCCTTTGATTTTAAGGTAG 3702 0.3887 MIQRMSSSSSNHGWAFDVFLSFRGNDTRSGFTGNLYKSLCDRGIKTFLDDEEVTRGEEIRPALFKAIEQSRIAIVVFSKNYASSTYCLEELVIILECIMKKGRLVWPIFYGVSPSYVRHQKGSYGKAFAKLEERFKNDKERVQKWKLALQEAANLSGWDFKTKHGYEYKFIQTIVEGVSKKIKCSPLHVANYPVGLDSRVQEVNSLLNVGSNQGVSIVGIYGVGGIGKTTIACAVYNFIADHFEGQCFLADIRENSMKYGLVHLQETILSEIVGEKSIKLGSINRGMAVLKSKLQRKKVLLILDDVDKLEHLNALAGDLSWFGYGSKIIITTRNKHLLHIHGVERTYEAEGLDYKEALELFSWHAFKNNEVGSSYTDISKRAILYSNGLPLALEILGSNLYGKTLSEWKAALDTYERIPDEDIQKKLEISYDGLKRNEKEVFLDMACFFRGYNLKDAISLLLQGRGFSPEYVIRVLIDKSLIKIDQYGFVRMHNLVVDMGREIVRQESRSEPGKRSRLWFYEDIVEVLENDKGTDAIEVIMLRFPKNKEVWWNGSELKKMTNLKILTIENACFSRGPEHLPSSLRVLKWWEYPSPSLPPEFDPRRLVTLDLSFSCKILGQQLQLMKFKSLTEMVLRGSKITRVPDMSGAQNLRKLCLDNCKNLVEVDDSIGFLDKLTWFTAIGCTNLKILPHSFKLTSLEYLSLRKCSTLRLLPKVLEEMKHVKNIDLCGTAIEELPFSFRNLTGLKYLVLDKCKMLNQIPITILVLPKLERLTAVKCGRYVNLVLGKSEKQKGLGSSESFKDITLNYHDLTPGCFPNIEFLVLTGTAFKVLPEYISQCNFLKNLVLDNCKELQEIRGVPPKIKYLSAINCTSLTHESRSLLLNQRLHEGGGTDFSLPGIMIPEWFDHCTMGPSLSFWFRNKFPRIALAAVGVLDRQGSFPKSVFHLLINGIQNLHCHFTAQSKLVTYHIFLSDVLFKSYNGELESVYRDDGWNHVEVSYVGPSMRAFPPTHRAKKGIIKWMGIHVYKQKTSMEDVRFTNPKSPKRLYDEFSKLDLNQNFRPSPKRSRGSQGMEICESPHIDHHQANNSYQGVSERLWLAIYSIIAPLEVKLLMFSICQNALPTYEYLFKRKLVDSPVCPICETEPETLEHVFLFCPWTRPLWFGSDFQWCIDVNSVQSFQLWLYKKLEEIKRVYPENANQISGLVVYICWAIWKGRNEFVLEGKHVNPLILR* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0913 1233 Pfam NB-ARC domain 200 431 IPR002182 GO:0043531
Apr3g0913 1233 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Apr3g0913 1233 SMART till_3 15 155 IPR000157 GO:0007165
Apr3g0913 1233 SUPERFAMILY L domain-like 538 882 - -
Apr3g0913 1233 Gene3D - 13 182 IPR035897 -
Apr3g0913 1233 PRINTS Disease resistance protein signature 217 232 - -
Apr3g0913 1233 PRINTS Disease resistance protein signature 293 307 - -
Apr3g0913 1233 PRINTS Disease resistance protein signature 386 400 - -
Apr3g0913 1233 PRINTS Disease resistance protein signature 694 710 - -
Apr3g0913 1233 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 158 IPR035897 -
Apr3g0913 1233 Gene3D - 183 344 IPR027417 -
Apr3g0913 1233 Gene3D Ribonuclease Inhibitor 695 889 IPR032675 -
Apr3g0913 1233 Pfam TIR domain 15 182 IPR000157 GO:0007165
Apr3g0913 1233 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 999 IPR044974 GO:0006952
Apr3g0913 1233 Gene3D - 351 439 IPR042197 -
Apr3g0913 1233 PANTHER ARCHAEAL ATPASE 26 999 - -
Apr3g0913 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Apr3g0913 1233 Gene3D Ribonuclease Inhibitor 530 694 IPR032675 -
Apr3g0913 1233 Pfam zinc-binding in reverse transcriptase 1096 1163 IPR026960 -
Apr3g0913 1233 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0913 Apr-Chr3 23714566 23726227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0913 4 778 WRKY Transcription Factor Family AT4G12020 34.207 2.22e-97 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0913 - - aprc:113858280 2490.69