Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0904 ATGGAAGGTGATCCTCATCATAGTCAAAACGGGATCCACAGGCCCAATTTCCCATTACAACTGTTAGAGAAAAACGATGAGCGCCAAATTGAAGCCAGCGCCGCGCCGAAGAAGCCGCCGCCGAAGCGCACGTCCATGAAGGACAGGCACACGAAGGTCGACGGTCGGGGGCGGCGAATCCGGATGCCGGCGGCGTGCGCGGCCAGGGTGTTCCAGCTGACGCGCGAGCTCGGCCACAAGTCCGACGGCGAAACCATCGAGTGGCTGCTCCAACAGGCAGAGCCCGCCGTGATCGCCGCCACGGGCACCGGCACAATCCCCGCCAACTTCACTTCTCTCAACATCTCGCTCCGCAGCGCCGGCTCCTCCCTCTCTTCTCCCTCTCACTTCTTCAACCGCCACGTCACCAGTAACTACTTCACCAACAATAATAACAACCCCTTCTCAACACCACCACCACCATTCTCTTCTAGAAACAACCTGGTTCTGCAAGATTCTAGAAGGGCCTTGTTCCCCGACGCCAACTGTTTTTTCAATTTCGATTCTGTTGGTAACGGCAATGCTGTTAAGAGAAGGAGAAGGGAAGGTGAAGAGGAAGTGACAGCGTCACCGAGTCATTTAGGAAGCTGTTTGTCGCAGTCGAGTACTGGGTCGATTCCAGCGAGTAATGCTTCGGTTCCAGCGAGTTTTTGGATGATGAGTGGTTGTGATTCCATTTGTGCAATTCCCTCCGTTGGGAATAGTGGTTTGTATAAAGGGACTGTGTCCAACTCTAACTCTTCTGCTGGTGGGATTCATTTTATGAATTTTGCTTCTCCAATGTCTCTATTGCCTGGTCAACAGCTAGGTTCAGGTGGTGCAATGCTCCCTGAAAGCAACTTGGGTATAATTGCGTCCCTTAATGGGTATAGGCCTATTCCGGCCAACGAGGAACATTGTGGAGATAGTAAGAATGATGTTGCAAGTGTATGA 972 0.5247 MEGDPHHSQNGIHRPNFPLQLLEKNDERQIEASAAPKKPPPKRTSMKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSAGSSLSSPSHFFNRHVTSNYFTNNNNNPFSTPPPPFSSRNNLVLQDSRRALFPDANCFFNFDSVGNGNAVKRRRREGEEEVTASPSHLGSCLSQSSTGSIPASNASVPASFWMMSGCDSICAIPSVGNSGLYKGTVSNSNSSAGGIHFMNFASPMSLLPGQQLGSGGAMLPESNLGIIASLNGYRPIPANEEHCGDSKNDVASV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0904 323 PANTHER TRANSCRIPTION FACTOR TCP23 26 312 - -
Apr3g0904 323 MobiDBLite consensus disorder prediction 188 214 - -
Apr3g0904 323 Pfam TCP family transcription factor 45 144 IPR017887 -
Apr3g0904 323 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 312 IPR005333 GO:0003700
Apr3g0904 323 MobiDBLite consensus disorder prediction 25 58 - -
Apr3g0904 323 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0904 Apr-Chr3 23450232 23451568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0904 1 318 TCP Transcription Factor Family AT1G69690 44.444 6.47e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr3g0904 TCP 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0904 - - aprc:113860120 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0904 3 23450232 23451568 Apr3g0904 3 23450232 23451568 ECH