Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0892 ATGGGTAACTGCATAGATTCTTCAGTTAAAGTGGAAGCAGCTCACAGTTCCAGAACCCCTTCTGGAATTTCAAAAGCTAGTCCTTCCAGCTTATCTATTCTGTCATACATTGAAACAAGTGACGCCTCAAGTCTTCCCACGCCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCAAATCTTAAGGCCTTCACCTTCAATGAGCTAAAGAATGCGACCAGAAACTTTCGCCCCGACAGTCTTCTTGGAGAAGGAGGATTTGGTTATGTTTACAAAGGGTGGATTGATGAACACACGTTTACAGCTGCGAAACCTGGATCAGGAATGGTCGTTGCTGTTAAGAAACTTAAGACTGAAGGTTTACAAGGTCATAAGGAGTGGCTGACTGAAGTTGACTACCTTGGCCAACTTCACCATCAAAATCTTGTTAAATTGATTGGATACTGTGTGGAGGGAGAGGACCGGCTGTTGGTCTATGAGTTTATGCACAAAGGGAGCTTAGAGAATCATCTGTTTAGAAGAGGACCACAGCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGTGCTGCTAGAGGACTCTCTTTTCTTCATAATGCCAAATCGCAAGTCATATACCGTGATTTCAAAGCATCTAATATCCTACTAGATGCAGCAGGCCCTACGGGTGATAGAACTCATGTCTCTACTCAGGTCATGGGTACTCAAGGATATGCAGCACCCGAATATGTTGCAACAGGTCGGTTGACAGCCAAAAGTGATGTATACAGCTTTGGGGTTGTGTTGCTTGAACTGTTGTCTGGTCGACGTGCTGTTGATAGAACAAAAGCTGGTATAGAGCAGAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAGAGAAGACTATTTCGGATTATGGATACCAAGTTGGAAGGCCAATACCCACAGAAAGGAGCCTACATGGCTGCTACTCTTGCTCTAAAATGCCTTAATCGTGAAGCCAAGGCAAGGCCTCCGATGACAGAGGTTTTAGAAACTCTTGAACAGATTGAAGTTTCAAAAACCAGTAGGAGAAATTCCCAATCAGAACAGAAGAGAGTCCATGTTTCTGTCAGAAAGTCTTCTGCACAAAATGGGTCTCCTTTAAAACTTGCTCCAACTGCATTCCCTTTGCAATCTCACCCACAATCTGCTTATGTACACTAG 1191 0.4408 MGNCIDSSVKVEAAHSSRTPSGISKASPSSLSILSYIETSDASSLPTPRSEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTAAKPGSGMVVAVKKLKTEGLQGHKEWLTEVDYLGQLHHQNLVKLIGYCVEGEDRLLVYEFMHKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGIEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAYMAATLALKCLNREAKARPPMTEVLETLEQIEVSKTSRRNSQSEQKRVHVSVRKSSAQNGSPLKLAPTAFPLQSHPQSAYVH* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0892 396 Gene3D Transferase(Phosphotransferase) domain 1 161 372 - -
Apr3g0892 396 ProSitePatterns Protein kinases ATP-binding region signature. 81 114 IPR017441 GO:0005524
Apr3g0892 396 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 10 393 - -
Apr3g0892 396 PANTHER OS01G0588500 PROTEIN-RELATED 10 393 - -
Apr3g0892 396 MobiDBLite consensus disorder prediction 349 383 - -
Apr3g0892 396 ProSiteProfiles Protein kinase domain profile. 75 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0892 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Apr3g0892 396 Pfam Protein tyrosine and serine/threonine kinase 79 342 IPR001245 GO:0004672|GO:0006468
Apr3g0892 396 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Apr3g0892 396 SUPERFAMILY Protein kinase-like (PK-like) 48 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0892 Apr-Chr3 23091232 23094432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0892 53 342 Glycoside Hydrolase AT3G07070 50.000 6.08e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr3g0892 PK_Tyr_Ser-Thr 4.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0892 - - gmx:100305401 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0892 3 23091232 23094432 Apr3g0892 3 23091232 23094432 ECH
Apr3g0892 3 23091232 23094432 Apr6g0186 6 1826585 1828563 ECH