Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0891 ATGGGGAAATGTAAGAAAGGTGAAAGGCATGGAGATATGCCAATTCCAAAGGACTGGAATGTTTTGAAAATAGAGAAGGGTATAGTGCTGGAGGCATGTAAGCTGAAGTGTTTTACCTATGATGTATTGAAAAATGCAACTCAAAAGTTCAACTGTCAAAACTTGATTGGCCGAGGAGGCTTTGGTGATGTTTATAAAGGATATCTCACTTACAGTACCATGGATGCTGCAAGATCAAATGAGGGCTTTCCAATAGCTGTTAAGATAATCAGGAGGCAAGGAGCACAAGGCGATGAAACATGGCTGAATGAAGTGACATATTTGAGCAAAATAAATCATTCAAACGTGGTGAAGCTCATAGGATTTTGCTATGAGGATGAGCATAGAATGCTGGTTTTTGAATACATGACTGGTGGAAGCTTGGCGGATCATCTCTTGGAAGAAGAAAGTGACTCAAAGCTAAATTGGACTAGAAGGATCAAAATAGCAGTAGGGATAGCACGAGGTTTGGATTATCTTCACACCTATGGAAGACCTCTCATTCATCGTGATATCAAAAGTTCCAATGTCCTTCTTGATGATAACTTCAATGCAAAGATCTCAGACTTTGGACTGGCTAGATATGGACCTGAAGGTAGCCTTACCCACGTGTCCACCAGAGTTGTTGGCACTAGAGGCTATTTTGCCCCGGAATACATAACCAGAGGGCATTTGACACCTAAAGCGGATGTATACAGCTTTGGAGTGGTTCTGCTAGAGATTTTATCCGGCTATGATGCAGTCAGAAAACATTCAGAAGGAGCAATGGGGGATCTTGCTCAGTGGGCAAAACCATTTCTAAGAAACAAGGTGGAGCTGCCCTATGTTATTGACAAGAGCCTTGGAAACAATGTTTCAATCAAAGCAGTCTCCGAATTTTCTGAAATAGTACTCAGCTGCCTCTGTTGTAGTCCCAAAAAGAGACCAACAATGGCCGAAGTTGTGGTTAGCTTAGAAAAACTAGAGCAAAATTTGGAACATCATAATCAGAGATTACATGGTAGCATCTGA 1050 0.4143 MGKCKKGERHGDMPIPKDWNVLKIEKGIVLEACKLKCFTYDVLKNATQKFNCQNLIGRGGFGDVYKGYLTYSTMDAARSNEGFPIAVKIIRRQGAQGDETWLNEVTYLSKINHSNVVKLIGFCYEDEHRMLVFEYMTGGSLADHLLEEESDSKLNWTRRIKIAVGIARGLDYLHTYGRPLIHRDIKSSNVLLDDNFNAKISDFGLARYGPEGSLTHVSTRVVGTRGYFAPEYITRGHLTPKADVYSFGVVLLEILSGYDAVRKHSEGAMGDLAQWAKPFLRNKVELPYVIDKSLGNNVSIKAVSEFSEIVLSCLCCSPKKRPTMAEVVVSLEKLEQNLEHHNQRLHGSI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0891 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Apr3g0891 349 ProSitePatterns Protein kinases ATP-binding region signature. 56 88 IPR017441 GO:0005524
Apr3g0891 349 PIRSF TyrPK_CSF1-R 142 258 - -
Apr3g0891 349 PIRSF TyrPK_CSF1-R 299 348 - -
Apr3g0891 349 PIRSF TyrPK_CSF1-R 48 151 - -
Apr3g0891 349 SUPERFAMILY Protein kinase-like (PK-like) 34 339 IPR011009 -
Apr3g0891 349 CDD STKc_IRAK 56 334 - -
Apr3g0891 349 PANTHER OS01G0588500 PROTEIN-RELATED 13 343 - -
Apr3g0891 349 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC-LIKE 13 343 - -
Apr3g0891 349 Pfam Protein kinase domain 53 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0891 349 Gene3D Transferase(Phosphotransferase) domain 1 136 347 - -
Apr3g0891 349 Coils Coil 324 349 - -
Apr3g0891 349 Gene3D Phosphorylase Kinase; domain 1 22 135 - -
Apr3g0891 349 SMART serkin_6 50 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0891 349 ProSiteProfiles Protein kinase domain profile. 50 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0891 Apr-Chr3 23087394 23090950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0891 35 337 Receptor kinase-like Gene Family AT3G58690 43.831 3.30e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr3g0891 Pkinase 3.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0891 - - aprc:113859637 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0891 3 23087394 23090950 Apr3g0891 3 23087394 23090950 ECH