Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0887 ATGAAGATATTGTGGGTTTCCTTCTATTACTTGTTGCTTGTTCTGCTTACTCCTCCTTCAATTGCACAGCTATCATCAAGTGAAAATAGAATTCTTTTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGTTCTTCAAGGATGGACAAGATGGACCAATTTGTGCTTCCTCCCTCCTTCACCTTCACTCAAGATAGTTTGTTCAAATGGTCATGTGACAGAACTAACTATCATTGGAAAGAAGAGTTCCCCATCTTCACACATCACCAAAGCAGCTTCTTGGAATTCCCTTTCAGGAAGCTTTTCCATTGATTCTTTCTTCACTGTGATGACAAAGCTTTCAAATTTGAAGGTGTTGTCATTGGTGTCCTTGGGTTTGTGGGGTCCTTTACCACCCAAGATCAACAGGTTCTGGTCTCTTGAAGTGCTGAACATTAGCTCAAATTTCATTTATGGGGAAATCCCATCATCAATATCCTCTATGAAGAATCTGAGGAGTTTGGTTTTGGCTGATAATCTCTTCAATGCAAGTGTTCCTGATCTTCAAAGTCTAACTTCTCTTGAAGAGCTCAACTTGGGAGGCAACAAACTTGGTCCTGATTTCCCTTCAGTGGGAAATAATGTTGTGAGTATTATTTTGAGAAATAACACACTGAGATCTCATATTCCTCCTCAAGTAATGCACTTAGATAAACTTGAGATATTTGACATCTCTTCCAATGAAATTTTTGGAAACATCCCATCCTCTCTTATCTCTTTGCCTTCCCTTCAGTACCTAAATTTGGCTTCAAACCAACTAGGTGGTAACCTCTCTGTGAATATAACCTGTAGTTCTTCACTAACATTTGTGGATATCTCACACAACCTTCTGGTAGGAAAATTGCCATCTTGCTTTGGTTCAATGTCTTCAAAGGCCGCAGTACTGTATTCTGGGAATTGTTTATCAACCAAAAGTTTGAATAATCAACAACATCCATCTTCTTATTGTAAGAAAGAAGGGGCTTTAGCTGTTAAGCCTCCAGCAAAAATGCTGAAGAAGGAATCAAGTGTGCAACTAGGCCTAATACTTGGTATAATTGGAGGAGTTGTAGTATTTGCAGGTGTTCTGGCTTTACTCATTGCGTTCATCTTGTGGAAGTCCAAAGCAGAAAGATCACAATCACATCATAAAATAGAAAAATCTTTAGCTGATAAATTTTCTGCCCGTGCATCTCCTACACCAAATTATGGACGTATTCCTCAGACAATGAAGCAAGCTGCACTTGGACTGCCACCATACCGTATTTTCACATCAGAGGAAATTGAAGATGCAACAAACAACTTTGACCCATCAAATCTAATAGAAGAAGGGTCACAAGGACAGCTGTATAAAGGTTGGCTCAGAGATGGTTCAATGGTCCTGGTTAACTGTGTAAAAATAAAGCAGAAGAACTTGCCCCACAGCATTATGCAGTACATAGAGGTATTACCCAATTTGAGGCATAGGCATATGGTGAGTGTTCTGGGACACTCTATCATTACTCAACAGGACCCTCCCCAAACAACAAGCACAGTCTACATTGTATTTGAATACATCTCAACTGTGTCATTGAGGGATCAACTTACAGATGGGAGAAAGAGAGAAATGGTGAAATGGCCACAAAGAATGGCAATCAGCATAGGCATTGCAAGAGGAGTCCAGTTCTTACACACTGGAGTTGCACCTGGCATATTTGGCAACAATCTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGCAGATACAAAATTTCATTGCAATCCAAGGGTGCACATAATGAACAAACTGCCACCAATAATAGTGGGAGCACAAATAATGCAGAAAAAGAAGATATATATCAGCTAGGAGTTATTCTACTTGAAGTCATCACTGGCAAACAAATTGCATCCTCCAGTGAAATAGAGGAGCTGAAGGACGAGCTGGAAAGAGGTTCATCAGAACTAGCATCAGTGCTAAGAAGTGCAATTGATCCTTCACTGCGGGGAACATATGCATATGAATCAATGAGAACTGCAGTTCAGATTACCATTAACTGTCTCTCCAAGGTTTCTAGCCAGCGCCCTTCTATAGAGGATGTTCTCTGGAATTTACAGTACTCAATGCAAGTTCAAGAGTCATGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2187 0.4001 MKILWVSFYYLLLVLLTPPSIAQLSSSENRILFQVQKLLEYPQVLQGWTRWTNLCFLPPSPSLKIVCSNGHVTELTIIGKKSSPSSHITKAASWNSLSGSFSIDSFFTVMTKLSNLKVLSLVSLGLWGPLPPKINRFWSLEVLNISSNFIYGEIPSSISSMKNLRSLVLADNLFNASVPDLQSLTSLEELNLGGNKLGPDFPSVGNNVVSIILRNNTLRSHIPPQVMHLDKLEIFDISSNEIFGNIPSSLISLPSLQYLNLASNQLGGNLSVNITCSSSLTFVDISHNLLVGKLPSCFGSMSSKAAVLYSGNCLSTKSLNNQQHPSSYCKKEGALAVKPPAKMLKKESSVQLGLILGIIGGVVVFAGVLALLIAFILWKSKAERSQSHHKIEKSLADKFSARASPTPNYGRIPQTMKQAALGLPPYRIFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSMVLVNCVKIKQKNLPHSIMQYIEVLPNLRHRHMVSVLGHSIITQQDPPQTTSTVYIVFEYISTVSLRDQLTDGRKREMVKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKIENILLDDSLNAKVSRYKISLQSKGAHNEQTATNNSGSTNNAEKEDIYQLGVILLEVITGKQIASSSEIEELKDELERGSSELASVLRSAIDPSLRGTYAYESMRTAVQITINCLSKVSSQRPSIEDVLWNLQYSMQVQESWTSSGNLSTKL* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0887 728 Pfam Leucine rich repeat 207 266 IPR001611 GO:0005515
Apr3g0887 728 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Apr3g0887 728 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 6 721 - -
Apr3g0887 728 Coils Coil 645 665 - -
Apr3g0887 728 Gene3D Ribonuclease Inhibitor 204 339 IPR032675 -
Apr3g0887 728 Gene3D Ribonuclease Inhibitor 25 203 IPR032675 -
Apr3g0887 728 Gene3D Transferase(Phosphotransferase) domain 1 526 723 - -
Apr3g0887 728 Pfam Protein kinase domain 447 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0887 728 PANTHER OS07G0166700 PROTEIN 6 721 IPR045272 GO:0004714|GO:0006468
Apr3g0887 728 SUPERFAMILY Protein kinase-like (PK-like) 421 708 IPR011009 -
Apr3g0887 728 SUPERFAMILY L domain-like 93 320 - -
Apr3g0887 728 ProSiteProfiles Protein kinase domain profile. 441 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0887 728 Gene3D Phosphorylase Kinase; domain 1 413 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0887 Apr-Chr3 22983024 22986775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0887 20 686 Miscellaneous Gene Families AT2G02780 47.384 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Apr3g0887 Pkinase 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0887 - - gmx:100803061 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0887 3 22983024 22986775 Apr3g0887 3 22983024 22986775 ECH