Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0875 ATGGGGTTTGGTGCTGAGAATGGTAAGGTGGTGGAGTCTTTGGATGTGTGTAAATCAAAGGGGAGAAAGAAGAAGAAGAAAGAGGATGGGGTAGTGGAAGAGGAAGAGACTGGGTGTTGGTTTAGGTTGAGGTTCATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTCAGTGGCACCAGCACTAATTATGCCGAAAGTAAATCGACTAATGATACAAGTCGAGATCAACCAACAGTCCCAGTAGTCTCTTCGACAACCACTAGTAATGCTGAAAGCAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAGTCGCTTCCAGGCTGCGAAAATTTACTTTCAATGATCTTAAGTTGGCAACCAGAAATTTTCGCCCTGAAAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTGTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCGGTGAAACCTGGCACAGGGCTTACTGTTGCCGTAAAAACCCTCAACCATGATGGGCTTCAGGGTCATAAAGAGTGGCTGGCTGAAGTCAATTTTCTTGGTGATCTAGTTCATCCAAATCTTGTTAAACTTATAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAATTTATGCCTCGGGGAAGCCTGGAAAACCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATAGCACTTGGAGCTGCAAAGGGTCTTGCTTTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTCAAAACTTCCAATATACTGTTGGATGCAGACTACAATGCTAAGCTCTCAGACTTTGGACTTGCAAAAGATGGACCAGAGGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACAGGACATCTTACATCAAGAAGTGACGTGTATAGTTTTGGAGTGGTACTACTTGAGATGTTGACTGGCAGAAGATCTATGGACAAAAACCGACCAAATGGCGAACACAACCTTGTGGAGTGGGCTAGACCACATCTAGGAGAGAGAAGAAGGTTCTACAGGTTGATAGACCCTCGCTTGGAAGGTCACTTTTCCATAAAAGGGGCTCAGAAAGCCGCTCATCTGGCTGCTCACTGCCTTAACCGAGATCCGAAAGCTAGACCCTTGATGAGTGAAGTTGTGGAAGTTTTAAAGCCTTTGCCAAACCTTAAGGACATGGCTAGTTCATCATATTATTTTCAGACAATGCAAGCTGACCGGTTTAGTGCAAGTCCAAATACTAGAAACGGGAGAACACAAGGAGCATTACTGACCCGGAATGGGCAGCAACAAAGGAGCCTATCAATACCACATGGTACTCATGCATCTCCATATCACCATCAGTTTCCCCAACAATCACCAAAACCAAATGGCAAGGCATAG 1455 0.444 MGFGAENGKVVESLDVCKSKGRKKKKKEDGVVEEEETGCWFRLRFIGSCISSRSKVDSSVSGTSTNYAESKSTNDTSRDQPTVPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLNRDPKARPLMSEVVEVLKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGALLTRNGQQQRSLSIPHGTHASPYHHQFPQQSPKPNGKA* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0875 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Apr3g0875 484 MobiDBLite consensus disorder prediction 469 484 - -
Apr3g0875 484 CDD STKc_IRAK 134 411 - -
Apr3g0875 484 SUPERFAMILY Protein kinase-like (PK-like) 114 431 IPR011009 -
Apr3g0875 484 ProSitePatterns Protein kinases ATP-binding region signature. 134 166 IPR017441 GO:0005524
Apr3g0875 484 Gene3D Transferase(Phosphotransferase) domain 1 214 430 - -
Apr3g0875 484 MobiDBLite consensus disorder prediction 450 484 - -
Apr3g0875 484 ProSiteProfiles Protein kinase domain profile. 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0875 484 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 60 474 - -
Apr3g0875 484 MobiDBLite consensus disorder prediction 54 100 - -
Apr3g0875 484 MobiDBLite consensus disorder prediction 54 103 - -
Apr3g0875 484 Gene3D Phosphorylase Kinase; domain 1 87 213 - -
Apr3g0875 484 Pfam Protein tyrosine and serine/threonine kinase 132 408 IPR001245 GO:0004672|GO:0006468
Apr3g0875 484 PANTHER OS01G0588500 PROTEIN-RELATED 60 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0875 Apr-Chr3 22818683 22822981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0875 75 408 Glycoside Hydrolase AT3G07070 53.254 1.74e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr3g0875 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0875 - - gmx:100807510 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0875 3 22818683 22822981 Apr3g0875 3 22818683 22822981 ECH