Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0864 ATGGGTGCAGGTGATTACTACAAGATCCTCAAAGTGAACCATAATGCCACAGATGAGGAGCTGAAGAGGGCATATAAGAGGTTGGCCATGAAATGGCACCCAGATAAGAATCATCAACAACAACATAGTGTTAAGAAAGAAGAAGCCGAGGCCAAGTTCAAGCAGATTTCAGAGGCTTATGATGTTCTTAGCGACCCCAAGAAGCGCCAGATCTATGATTTCTATGGCCACTATCCCCTTAAGGTGAACAAGGAAAACAGTGATGGGGGTGTTAGGATTTCCAATGGTGAAAAAGAACGAGTGGTGGAGAGCAAATTGGTGTGTACCCTTGAGGAACTTTACAAAGGTTGCAAGAGGAAGTTGAGGATCTCAAGGGCTGTTACTGACGAATTTCGTCAGTTGAAGACTTTGGAAGAGGTCTTGAAAATAGATATTAAACCTGGTTGGAGGAAGGGCACAAAAATAACATTTCCTGGAAAAGGCAACCAAGCAGCAGGAACTACTACTGCTGAGGATCTAATCTTTGTGGTGGATGAGAAACCTCATGCTTTTTTCAAGAGGGATGGCAATGATTTGGTAGTCACACAGAAAATCTTGCTTGTAGAGGCTCTTGTGGGAAAAACTCTCCACTTGACAACCTTGGATGGAAGAGACCTCACAATTCATGTGACAGATATTGTGAAACCAGGCTATGTGTTGGTGGTCCCAAATGAAGGAATGCCCATTACAAAGGAACCTGGTAAGAAAGGAAACTTAAGAATCAAGTTTGATGTTATGTTCCCATCAAGGCTTACCACACAGCAGAAGCATGAGCTGAAAAAGATTCTGAGCAATACTGATTAG 843 0.4282 MGAGDYYKILKVNHNATDEELKRAYKRLAMKWHPDKNHQQQHSVKKEEAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLKVNKENSDGGVRISNGEKERVVESKLVCTLEELYKGCKRKLRISRAVTDEFRQLKTLEEVLKIDIKPGWRKGTKITFPGKGNQAAGTTTAEDLIFVVDEKPHAFFKRDGNDLVVTQKILLVEALVGKTLHLTTLDGRDLTIHVTDIVKPGYVLVVPNEGMPITKEPGKKGNLRIKFDVMFPSRLTTQQKHELKKILSNTD* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0864 280 Pfam DnaJ C terminal domain 102 261 IPR002939 -
Apr3g0864 280 SUPERFAMILY Chaperone J-domain 4 81 IPR036869 -
Apr3g0864 280 ProSiteProfiles dnaJ domain profile. 5 76 IPR001623 -
Apr3g0864 280 Gene3D - 182 262 - -
Apr3g0864 280 SMART dnaj_3 4 68 IPR001623 -
Apr3g0864 280 Pfam DnaJ domain 5 73 IPR001623 -
Apr3g0864 280 PRINTS DnaJ domain signature 7 25 IPR001623 -
Apr3g0864 280 PRINTS DnaJ domain signature 25 40 IPR001623 -
Apr3g0864 280 PRINTS DnaJ domain signature 48 68 IPR001623 -
Apr3g0864 280 PRINTS DnaJ domain signature 68 87 IPR001623 -
Apr3g0864 280 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 271 IPR008971 GO:0006457|GO:0051082
Apr3g0864 280 SUPERFAMILY HSP40/DnaJ peptide-binding domain 104 182 IPR008971 GO:0006457|GO:0051082
Apr3g0864 280 Gene3D DnaJ domain 2 95 IPR036869 -
Apr3g0864 280 CDD DnaJ_C 102 264 - -
Apr3g0864 280 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 278 - -
Apr3g0864 280 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 278 - -
Apr3g0864 280 CDD DnaJ 5 65 IPR001623 -
Apr3g0864 280 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Apr3g0864 280 Gene3D - 100 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0864 Apr-Chr3 22548513 22550763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0864 6 73 C2H2 Transcription Factor Family AT1G74250 38.235 1.10e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0864 K09510 - gmx:100786068 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0864 3 22548513 22550763 Apr3g0864 3 22548513 22550763 ECH