Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0858 ATGGATAAGAGTGAGGTGAAGCTTATTGGCAAATGGTCTAGTCCTTATGTGATGAGGGTGAAGATTGCCCTCAACATCAAATCCCTTGAATATGAATACTTTGAAGAAACCCTGAACCCCAAAAGTGATTTTCTTCTTCAATCCAACCCTGTGTATGGTCGAGTCCCAGTACTCCTCCACTATGACAAACCCATCTGTGAGTCTTTGGTCATAGTTGAATACATAGATGAAACATGGCCCTTTGGTCCTTCTATCCTTCCCTCTGATTCATATGATAGAGCAGTTACTCGTTTCTGGGCTGCTTACATAGATGACAAGTGGTTTCCTTCCATGAAAAGCATTTTGATTGTTGAAAGTGAGGAGGAAAGGAAGCCATACTTTGAGGTGTTAGAAGAAGTGCTTGAGAGGATGGAGGATGCTTTTGGGAAATTGAGCAAAGGAAAGGCCTTTTTTGGTGGAGACAGGATTGGGTTCCTTGATATTGCTTTTGGGTGCTTCCTGGGATGGGTCAGTGTGATAGAGCATAGATATGAAAGGAAACTGCTGGTGGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGATCCTGCTGTGAAGGGGCTCATCCCAGAGACTGATAGACTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAACTGCTATTGGCAAGAAATAG 696 0.4353 MDKSEVKLIGKWSSPYVMRVKIALNIKSLEYEYFEETLNPKSDFLLQSNPVYGRVPVLLHYDKPICESLVIVEYIDETWPFGPSILPSDSYDRAVTRFWAAYIDDKWFPSMKSILIVESEEERKPYFEVLEEVLERMEDAFGKLSKGKAFFGGDRIGFLDIAFGCFLGWVSVIEHRYERKLLVEAKAPALVKWAERFAADPAVKGLIPETDRLVEISKSLQIKWRTAIGKK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0858 231 Gene3D Glutaredoxin 1 85 - -
Apr3g0858 231 SFLD Glutathione Transferase (cytosolic) 2 225 IPR040079 -
Apr3g0858 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 218 IPR045073 -
Apr3g0858 231 Gene3D - 86 227 - -
Apr3g0858 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Apr3g0858 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Apr3g0858 231 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Apr3g0858 231 SFLD Main.3: Omega- and Tau-like 2 225 IPR045073 -
Apr3g0858 231 PANTHER GLUTATHIONE S-TRANSFERASE U17 4 218 - -
Apr3g0858 231 CDD GST_N_Tau 6 79 - -
Apr3g0858 231 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Apr3g0858 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
Apr3g0858 231 SUPERFAMILY GST C-terminal domain-like 85 218 IPR036282 -
Apr3g0858 231 CDD GST_C_Tau 91 218 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0858 Apr-Chr3 22472087 22473661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0858 1 220 Glutathione S-transferase Gene Family AT1G10370 57.466 6.65e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0858 K00799 - cam:101508281 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0858 3 22472087 22473661 Apr3g0858 3 22472087 22473661 ECH
Apr3g0858 3 22472087 22473661 Apr7g1554 7 22649424 22650483 PCT