Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0853 ATGACAACCTCTTCTTCTTTGTCTTCTGCCGTTTCTGCATCGTTTCATCCCAAAAGGTATGATGTTTTTATCAGCTTCAGAGGTGAAGACACCCGTAGTGGCTTCACGAGTCACCTACGCGATGCTCTGATTCGTAAGCAGATTCAAACATATATGGATGATAGACTCAACAAAGGAGATGAGATCTCAGCAGCGCTTTTCAAAGCAATTGAAGATTCACACATTTCCATCATCGTTTTCTCAAAAAATTTTGCTACTTCAAAGTGGTGCTTGGATGAACTCCTTAAAATACTCGAATGTAAGAACAAGGGACAGGATGTGATACCTGTGTTCTATAAAGTTGACCCATCGAATGTGCGAAAGCAAAAACGGAGTTTTGAGGAAGCGTTCGCAAAACATGAGCGTGAATTCAGCAACAACCAAGTCAAGTTGACCAAGTGGAAACAAGCTCTGTTCGAAGCAGCGAATATAGCTGGTTGGGACTCCCGCATATACGAGGACGAATCAAAACTCCTTTGCAAGATTGTTGAAGATGTTTTGAAAAAGTTAGAACATAAATACCCAAGAAGAGAATCAAAATGTATTTTTGGGATCAAGGAAAATGTTGCACCTATTGAATCTTTATTAAAAGAATTTCAAATCATTGGAATTTGGGGCATGGGCGGCATGGGTAAAACAACCATTGCCAAATGGTTGTTTGACAAATACTCTCCTCAGTACGAAGGATCATGTTTTCTGGCAAATATAAGGGAAAATTTTAGAAATGATAAAAAAGCACTACGCGATGAGCTTATTTCCATGCTTTTAGACGATCATGAGAAAACAAACAACTTGGAATCCTATGTAGTTTGGAGGAGGCTCTATTGTAAAAGAATTTTCATTGTGCTTGATGATGTAAGTGCTTCAAAACAATTGGAATATCTAGCAGGTAAACTTCAATGTTTTGGGTCAAATAGTAGAATCATTATTACAACTAGAGACAAGCATGTGCTACTATGCAAAGGCGTTGATAAAATACATAATGTTAAGCCATTGAAATTGGAAGAATCCCTTCAGCTTTTTAGCTTGAATGCCTTCAACCAAAACCATCCCGTAATGGGATATGGAGAGTTATCAAATAGAGTAGTTGATTATGCCCAAGGGATTCCATTAGTTTTAAAGGTTTTAGGCTCTTTTCTTTGTTCAAAAAGTGAAAAAGAATGGGAATGTGCTTTGGAAAAATTACAAAGGATTCCCAATGAAGAAATTCACAGCTTGTTAAAGTTAAGTTATGATGGACTAAATCATGAAGAGAGGGAAATATTTCTGGACATTGCTTGTTTTCTGAAGGGACAGCGTAAAGATCATGTCATAAGTCTATTAGACAGCTATGACTTCTACGCAGAAATTGGAATAAGAAGCCTTCAAGATAAAGCTCTCATAACTATAGAGCATGATGCAATACAAATGCATGATTTGATACAAGAAATGGGTTGGGAAATTGTTCGTCAAGAATCTATCAAAGAACCTGGTGGACGTAGCCGATTGTGGGATCCTAAGGAAGTTTATGATGTACTGAAAAATAAAAGGGGGACTGATAAAGTTGAAGGGATACTTTTAAATATGTCTGAAATTAGAGATCTACAGTTGAATGTTGATACATTTAAAAAGATGAGTAAACTACGATTTGTGAAATTTTGTTCGTCTTATGGATATTCTAGTTTGCACCTTCCCAGTATGGATGTCGAATTGTTTGCTGATGGATTGAAGTACGTTCAATGGGATGGATTCCGTTCAAAATCTTTGTCATTAATGTTTTGTCCAGAGAAACTTGTTGAGCTTTCAATGCGAGGTAGCCACCTTGAGAAACTTTGGGATGGAGTCCAGAATTTGGGTAATTTAAAGAGAATAATCCTTAGTGGATCCAAAAGCTTGGTGGAACTCCCAGATCTCTCTCTGTCCTTGAATCTTGAAGAAGTAGATCTCTTTCGTTGTGTAAGCTTGCGTAATGTTCATCCATCTATTTTATCTCTCCATTCGCTTGTTTCTTTGAATCTATATGGGTGCAAAAAATTGAAGAGTCTCGAAAGTGAGAGTCATTTACAATCTCTTAAATTTCTTAAACTTGATGGTTGCTCAAGCCTCAAGAAATTTTCTGTGTCATCAGAAGAAATGAGAAGATTGCAACTCCAGGGAACAAGGGTTAAAATGTTATCCTCATCTATTGGGCGTTTCCGCAAACTTGAATGCCTCATACTTGAAGGCTTGAGAGTTAAGAATCTTCCAAGGGAGTTATCTTGTTTGAGAAATCTTAAAGAACTTAGAATTTTGGATGCTTGCAAGCTAATGATTCACAAACAAGAGTTGGAAGTAATTTTTTGTGGATTGCAATCATTAAGAGCGCTACATTTGAGGGATTGTAGTTACTTATTTGAACTACCTGATAACATTAGTGTATTGTCTTCCCTATATGTGTTAAATTTATGTGGGAGCAATATTGAATGTTTGCCCACTAGCATAAAGAAACTTGCAAATCTGGAACATCTTATCTTAAGTAGATGCAAGAGGCTTGTGTCTCTACCAGATCTTCCTCAGTCAGTGAGAGAGATAGTTCTATCAGGAAGCAATGTTGAGTGCTTACCTATAAGCATCAAGCAACTTGAAAATTTGGAAGGACTTAACTTACGTGATTGTAAGAGACTTCAGTCTATACCAAAGCTTCCAATATCCATTAAGTGGGTACATCTAAATGGAACCAAGATTATGTGTTGGCCTTTAAGGCTTAACAAACTTGAATTGACTAATCTTTCCTTAGGTGATATTGAGCATGTACCTACAAGCTTCAAGCAATTTACGAAGCTGAAATATCTCTCCTTAATTGATTGCAAGAGGCTTGTGTCTCTGCCAGAACTTCCACTATCAATAATTGGGCTACATCTAACTGGAAGCAACATTGAGTTTTTACCTGCATGCATCAACCAACTTACAAACCTGAACAATATTCAATTACGTGATTGTGAAAGGCTTCAATCTCTGCCAGAGCTTCCACAATCAGTTAGAAATTTAGATGTTAATAACTGCACATCACTGAAGAGAATAGCTTCAACAGTATGGAAAGGAAAGAGAGAATTTCGGTATGATTTTAGAAATTGTGTGAACTTGGATGCACATGTAGCGTCCTCTATTTGGGAAGACACTTATTTCTCCATAAAGGAAAGTAAAGACCGTGGACTCTCTATTTGTTTGCCAGGTGGCAAAGTTCCAGAATGGTTCGAAGATAATAGGATAGTAGGGGATTCCATAACTATTGAAGCTGATCGACCTTGGCAAGCAAAGGCTTTTGCTTTTTGCATAGTACTTTCTCCATTCTCCTCAAATGAAGATGAATATAGTTTGTCTGTTGTAAGTTCTCAAGATATTGGCATGCCTTTACCTCTTGGTACTTGTGGGGATATAATTTATTGGTATAAATTTGAAGGTGTTAGAGAATTAAATTCTGATCATGTTCACTTGTGGTCTACTCTTCCATTTGCTTCTTTTCCAAAATCAAAGCTCAATTGCGAGTTATCATTTGAATTCCTTGTTAGTGGTGGAAGCGGAAAGCCACATCGTGATATCCGAATCAAAGAGTGTGCAGTGTGCCCAATATATGAATAA 3636 0.3716 MTTSSSLSSAVSASFHPKRYDVFISFRGEDTRSGFTSHLRDALIRKQIQTYMDDRLNKGDEISAALFKAIEDSHISIIVFSKNFATSKWCLDELLKILECKNKGQDVIPVFYKVDPSNVRKQKRSFEEAFAKHEREFSNNQVKLTKWKQALFEAANIAGWDSRIYEDESKLLCKIVEDVLKKLEHKYPRRESKCIFGIKENVAPIESLLKEFQIIGIWGMGGMGKTTIAKWLFDKYSPQYEGSCFLANIRENFRNDKKALRDELISMLLDDHEKTNNLESYVVWRRLYCKRIFIVLDDVSASKQLEYLAGKLQCFGSNSRIIITTRDKHVLLCKGVDKIHNVKPLKLEESLQLFSLNAFNQNHPVMGYGELSNRVVDYAQGIPLVLKVLGSFLCSKSEKEWECALEKLQRIPNEEIHSLLKLSYDGLNHEEREIFLDIACFLKGQRKDHVISLLDSYDFYAEIGIRSLQDKALITIEHDAIQMHDLIQEMGWEIVRQESIKEPGGRSRLWDPKEVYDVLKNKRGTDKVEGILLNMSEIRDLQLNVDTFKKMSKLRFVKFCSSYGYSSLHLPSMDVELFADGLKYVQWDGFRSKSLSLMFCPEKLVELSMRGSHLEKLWDGVQNLGNLKRIILSGSKSLVELPDLSLSLNLEEVDLFRCVSLRNVHPSILSLHSLVSLNLYGCKKLKSLESESHLQSLKFLKLDGCSSLKKFSVSSEEMRRLQLQGTRVKMLSSSIGRFRKLECLILEGLRVKNLPRELSCLRNLKELRILDACKLMIHKQELEVIFCGLQSLRALHLRDCSYLFELPDNISVLSSLYVLNLCGSNIECLPTSIKKLANLEHLILSRCKRLVSLPDLPQSVREIVLSGSNVECLPISIKQLENLEGLNLRDCKRLQSIPKLPISIKWVHLNGTKIMCWPLRLNKLELTNLSLGDIEHVPTSFKQFTKLKYLSLIDCKRLVSLPELPLSIIGLHLTGSNIEFLPACINQLTNLNNIQLRDCERLQSLPELPQSVRNLDVNNCTSLKRIASTVWKGKREFRYDFRNCVNLDAHVASSIWEDTYFSIKESKDRGLSICLPGGKVPEWFEDNRIVGDSITIEADRPWQAKAFAFCIVLSPFSSNEDEYSLSVVSSQDIGMPLPLGTCGDIIYWYKFEGVRELNSDHVHLWSTLPFASFPKSKLNCELSFEFLVSGGSGKPHRDIRIKECAVCPIYE* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0853 1211 SUPERFAMILY L domain-like 482 854 - -
Apr3g0853 1211 Pfam NB-ARC domain 207 419 IPR002182 GO:0043531
Apr3g0853 1211 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 872 1139 IPR044974 GO:0006952
Apr3g0853 1211 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 865 IPR044974 GO:0006952
Apr3g0853 1211 Gene3D - 15 183 IPR035897 -
Apr3g0853 1211 Pfam Leucine Rich Repeat 603 622 IPR011713 -
Apr3g0853 1211 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 872 1139 - -
Apr3g0853 1211 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 865 - -
Apr3g0853 1211 SMART till_3 19 157 IPR000157 GO:0007165
Apr3g0853 1211 Gene3D - 345 428 IPR042197 -
Apr3g0853 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 438 IPR027417 -
Apr3g0853 1211 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 160 IPR035897 -
Apr3g0853 1211 Pfam TIR domain 20 193 IPR000157 GO:0007165
Apr3g0853 1211 Gene3D - 184 338 IPR027417 -
Apr3g0853 1211 ProSiteProfiles TIR domain profile. 18 183 IPR000157 GO:0007165
Apr3g0853 1211 PRINTS Disease resistance protein signature 214 229 - -
Apr3g0853 1211 PRINTS Disease resistance protein signature 286 300 - -
Apr3g0853 1211 PRINTS Disease resistance protein signature 379 393 - -
Apr3g0853 1211 PRINTS Disease resistance protein signature 692 708 - -
Apr3g0853 1211 SUPERFAMILY L domain-like 761 1026 - -
Apr3g0853 1211 Gene3D Ribonuclease Inhibitor 717 905 IPR032675 -
Apr3g0853 1211 Gene3D Ribonuclease Inhibitor 526 716 IPR032675 -
Apr3g0853 1211 Gene3D Ribonuclease Inhibitor 906 1056 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0853 Apr-Chr3 22379887 22385117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0853 791 957 WRKY Transcription Factor Family AT4G12020 34.270 8.03e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0853 - - aprc:113859619 2402.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0853 3 22379887 22385117 Apr3g0853 3 22379887 22385117 ECH