Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0852 ATGAAGGGATGGGATGGGATTCAATCTTCTCTCTCTTCTGGATCGAGTTCCACGTTGAACCATCGAGTCCAGTCTCAAACGATTCGACTCGGGCGAGTCCAGCCTCAGGCCCCAACTTACCGCACCATCTTCTGCAACGATCGCGATGCCAATTTTCCCATCCGGTTCAAGTTCAGACGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACGCCAATTAGTCCTGTGTCTCCAATAACTAACGTGCTTCCTCTATCTCTGGTGCTTCTTGTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCCATAAACAATAATATGATAGATGTTTTGCAAGATCAGAAGTGGGAGTCTATACCCTGGAAAAAATTGCAGGTTGGCGACATTGTCAAGGTTAACCAGGATGGATTCTTTCCAGCAGATCTGCTTTTCTTGGCTAGTACTAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGGATTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTATACCTTCACCGGAAATCTTATAATTCAAAAGCAAACCCTGCCTCTCAGTCCAAATCAAATTTTGTTGCGAGGTTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTGGTTATATTTACAGGACATGAAACAAAGGTGATGATGAATGCCATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAACTCATACTCACTCTATTTGCCACTCTATTCATGATGTGTTTCATTGGAGCCATAGGCAGTGCAATCTTCGTAAACAAAAAATATTTTTACTTACATCTTGATTCGTCGGAGGAGGGCTCGGCACAGTTCAACCCAAAAAACAGATTTTTGGTTTTTCTCCTAACTATGTTTACCCTTATCACACTATACTCAACGATCATCCCCATCTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATACTGAAACCAATACACCTGCATTGGCAAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAGTACATTTTCTCTGACAAAACTGGAACTCTAACAAGAAATTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGCAATGGTGTGACTGAAATTGAGAGAGGATTAGCAGAGCGCAATGGCATGAAGATTGAGGAAAATAGATCTCCCAATGCAGTGCTTGAGAGGGGTTTTAATTTTGATGATCCTAGGCTGATGAGAGGAGCTTGGAGGAATGAGCCAAATCCTGATGTCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCACACTGTATTGCCTGAGGGTGAGGAGTCCCCAGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAAAACTTTGGTTTCTTTTTCTACAGACGCACACCTACAATGATATATGTTCGTGAATCCCATGTTGAGAAGATGGGCAAAATTCAAGATGTATCTTATGAGATATTAAATGTGCTTGAGTTTAATAGTACGAGGAAGCGCCAGTCTGTTGTATGTCGTTATCCAGATGGGAGGCTTGTACTATACTGTAAGGGTGCTGATTCCGTAATCTACGAGAGACTGGCTGATGTTAATAATAATATCAAGAAAGTCACTAGGGAGCATTTAGAACAATTTGGATCTTCTGGACTGCGTACATTATGCCTAGCCTACAAAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTAAATGATCGTGAAAAGAAGTTAGACGAGGTGGCAGAACTTATTGAAAATGATCTCATTTTAATTGGTAGCACGGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGGTTGCATAGAGACTCTTCAAAGAGCTGGTATTAAAATTTGGGTTCTCACGGGAGACAAAATTGAAACAGCAATAAACATAGCATATGCATGCAACTTAATAAATAATGAGATGAAGCAATTTGTAATTAGTTCAGAAACAGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATTAAAGAAGAAGTGAAAAAAGAGTTGAAGAAATGCCTTGAAGAAGCTGAGAGCTATTTTCACTCCGTCTCTGGACCAAAGTTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCCTTGGATCCAAGTTTAAGAGTGATGTTACTGAATCTAAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGGGTCTCTCCTTTACAGAAAGCGCAGGTCACCAGTATGGTCAAGAAAGGTGCACGGAAAATAACACTAAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAGGGAATGCAAGCGGTGATGGCCAGTGATTTTGCCATTGCACAGTTTCGTTACCTTACAGATTTGCTTCTTGTTCATGGCCGATGGTCATATTTGCGAATATGCAAGGTTGTGCTGTACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAATTTTGGTTTACATTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCTTTATATAATGTTATCTTCACAGCACTGCCTGTAATCATTGTTGGACTCTTTGACAAGGATGTCAGTTCATCTCTGTCCAAGAAGTATCCTGAACTATATATGGAGGGTATAAGAAATGTTTTCTTCAAATGGAAAGTTGTGGCCATATGGGCCTTCTTTTCTGTATACCAGTCTCTAATATTCTTCTATTTTGTGAGTACGTCAAATTTAAGTGCTAAAAACTCAGCAGGAAAGATATTTGGACTTTGGGATGTCAGTACAATGGCCTTCACATGTGTTGTAATAACCGTCAACTTGCGACTTATTATGATTTGCAATTCGATCACTAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCCTGGTTTATTTTTATTTTTATATATTCAGGGATTTCCACTCCTTATGATCGTCAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACACTCTACTTCTACCTCATGCTACTACTAGTTCCCGTTGCTGCTCTTTTCTGTGATTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAGATTATTCAAGAAATGCATAGACATGAGCTAGATAGCACTGGTAGGGCACAGCTACTGGAGATAGGGAACCAGCTTTCGCCAGCTGAGGCAAGGAGCTATGCTATATCACAACTCCCACGTGAGCTATCAAAGCACACTGGGTTTGCATTTGATTCACCTGGGTATGAGTCTTTTTTCGCTGCACAGCTCGGTGTATATGCCCCACCAAGGGCATGGGATGTTGCAAGACGAGCTAGCATGATGAAAGCACGGCCGAAGATTGGGCAGCGTAAGTAA 3612 0.4056 MKGWDGIQSSLSSGSSSTLNHRVQSQTIRLGRVQPQAPTYRTIFCNDRDANFPIRFKFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMAINNNMIDVLQDQKWESIPWKKLQVGDIVKVNQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKGLEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHTETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEENRSPNAVLERGFNFDDPRLMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGEESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTMIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLADVNNNIKKVTREHLEQFGSSGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPGCIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKKELKKCLEEAESYFHSVSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTSNLSAKNSAGKIFGLWDVSTMAFTCVVITVNLRLIMICNSITRWHYISVGGSILAWFIFIFIYSGISTPYDRQENIYFVIYVLMSTLYFYLMLLLVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRHELDSTGRAQLLEIGNQLSPAEARSYAISQLPRELSKHTGFAFDSPGYESFFAAQLGVYAPPRAWDVARRASMMKARPKIGQRK* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0852 1203 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Apr3g0852 1203 PRINTS P-type cation-transporting ATPase superfamily signature 830 849 - -
Apr3g0852 1203 Pfam Phospholipid-translocating P-type ATPase C-terminal 858 1108 IPR032630 -
Apr3g0852 1203 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 57 1195 - -
Apr3g0852 1203 SUPERFAMILY HAD-like 387 872 IPR036412 -
Apr3g0852 1203 CDD P-type_ATPase_APLT_Dnf-like 58 990 - -
Apr3g0852 1203 Gene3D - 528 662 IPR023299 GO:0000166
Apr3g0852 1203 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 57 1195 - -
Apr3g0852 1203 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1108 IPR023298 -
Apr3g0852 1203 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 803 909 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g0852 1203 Pfam E1-E2 ATPase 116 355 - -
Apr3g0852 1203 Gene3D - 99 264 - -
Apr3g0852 1203 SFLD C1.7: P-type atpase like 381 881 - -
Apr3g0852 1203 Gene3D - 663 870 IPR023214 -
Apr3g0852 1203 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 406 668 IPR023299 GO:0000166
Apr3g0852 1203 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Apr3g0852 1203 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1116 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr3g0852 1203 Pfam Cation transport ATPase (P-type) 494 591 - -
Apr3g0852 1203 SUPERFAMILY Calcium ATPase, transduction domain A 116 260 IPR008250 -
Apr3g0852 1203 SFLD p-type atpase 381 881 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0852 Apr-Chr3 22346306 22368677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0852 7 1202 Primary Pumps ATPases AT1G59820 77.441 0.0 2016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0852 K14802 - gmx:100815547 2246.08