Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0850 ATGCCGTCTCACGCGGATCTGGACCGTCAGATCGAGCACCTGATGGAGTGCAAGCCTCTATCAGAGTCGGAGGTGAAGGTGCTTGCACCCGATACCAATTACCTCTTTATGGGTGATTATGTAGATCGTGGATACTATTCAGTGGAGACTGTTACGCTTCTGGTGGCCTTGAAAGTCCGTTACAGAGACAGAATCACAATTCTCAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGGCTTCTACGATGAATGCTTGAGAAAATATGGAAATGCCAATGTGTGGAAATACTTTACTGACTTATTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGATTTTCTGCTTGCATGGAGGTCTCTCCCCTTCTTTGGATACACTGGATAATATCAGAGCATTGGATCGTATACAGGAGGTTCCACATGAAGGACCAATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGCTGTGGGTGGGGAATTTCTCCACGTGGTGCTGGATACACATTTGGACAGGATATAGCTGCTCAATTCAATCATACCAATGGTCTCTCCCTGATATCCAGAGCTCACCAGCTTGTTATGGAAGGATACAATTGGTGCCAGGACAAGAATGTGGTAACAGTATTTAGTGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTGGAAATTGGAGAGAACATGGATCAGAATTTTCTTCAGTTTGATCCAGCTCCCCGGCAAATTGAGCCTGACACTACACGCAAGACTCCTGATTATTTTTTGTAA 792 0.4457 MPSHADLDRQIEHLMECKPLSESEVKVLAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0850 263 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 28 - -
Apr3g0850 263 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 29 263 - -
Apr3g0850 263 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 28 - -
Apr3g0850 263 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 29 263 - -
Apr3g0850 263 SUPERFAMILY Metallo-dependent phosphatases 6 250 IPR029052 -
Apr3g0850 263 Pfam Calcineurin-like phosphoesterase 27 196 IPR004843 GO:0016787
Apr3g0850 263 ProSitePatterns Serine/threonine specific protein phosphatases signature. 68 73 IPR006186 GO:0016787
Apr3g0850 263 CDD MPP_PP2A_PP4_PP6 6 247 - -
Apr3g0850 263 Gene3D - 26 263 IPR029052 -
Apr3g0850 263 SMART pp2a_7 1 247 IPR006186 GO:0016787
Apr3g0850 263 PRINTS Serine/threonine phosphatase family signature 34 61 IPR006186 GO:0016787
Apr3g0850 263 PRINTS Serine/threonine phosphatase family signature 67 91 IPR006186 GO:0016787
Apr3g0850 263 PRINTS Serine/threonine phosphatase family signature 102 128 IPR006186 GO:0016787
Apr3g0850 263 PRINTS Serine/threonine phosphatase family signature 131 158 IPR006186 GO:0016787
Apr3g0850 263 PRINTS Serine/threonine phosphatase family signature 187 207 IPR006186 GO:0016787
Apr3g0850 263 PRINTS Serine/threonine phosphatase family signature 209 225 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0850 Apr-Chr3 22275770 22280551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0850 34 182 Calmodulin-binding Proteins AT5G63870 35.676 1.15e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0850 K04382 - nnu:104608013 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0850 3 22275770 22280551 Apr3g0850 3 22275770 22280551 ECH