Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0844 ATGGCTTTGTATATGATGCCTCAATCATGGCTTCTTTTGAGCCTTTTTTTCGTTTCAATACTAACCTGTCATTGCCAGATTAACAATTCTCCTCAGAACATTGAGACTTTTTTTCCAAATGAAACTTCAGCTCCAGGACCAGCAACACAACAACCTAAGCCACCACGACCATCAGAACCAACCCAAAAGCAGGACCAGGGACCAGTGGCTACTCCCAAAAGTACTTCATCAAATGGTAAAATAGCTAAGGCTGTGGCTGCGACTGCAGCAAGCACTATAGTACTTTGTGGTTTGATTTTCTTCTTGATTCAGAGGTGCCTAAGGTCAAGAAGGAGAAAGGAGATTACTAACACTGCTTCTGGTGGGGACGGCCGTGTTGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGAAATGTCAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAACTTGAAGGAAAGAACTCCAACATAGATCTTCATAAAGAGGTCGCCAGTAGTCCCAAAAACAAGGAAAAAGAAGATGATCATCATGATCTTGAAGAAAATCAAGTGAAAAAATCCAAGTCCATCCAAGAAATTCCTTTGCTTCGAGGGAAATCTTCAACTTCCCACTTAAACATACCTCCAGGAGATGATGAACCATACAAAATTACAAGAATTCCCCCTCCACCTTCTGCTTCTACTCTACCTCCTACAATTCCCAGTCTTCCTGCATCAGTTGGGGTTGCTATCAAGGGTGTTCAGAAACCAGACTCTCCAACTGAATCATCCACTCCACCCCCTCCTGCTTCACCATCAACACCACCCTCGACTTCTTTCTCAGCAGTTCCAAAAATGAGTAGCTCTACACCAGCACGTCCACCTCCTCCAATGCCAGAGAGAAAGAGTCCAGCAGCACCACCTGCTCCTCCCCCAATCCCAGCTAGAATGAGTCCAGCACCACCACCTCCTCCACCATCATCAAAATCACGACCTGCTTCCGTTGAAATGCCAGTTATCAAGCAAAGAAACTCTTCAGGGAAAGGCATGCCAGATACCAGCAGTGATCAAGTGAAGCTGAAGCCTTTGCATTGGGACAAGGTGAATACTAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGTTCTTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTCGGTTATGTCGCCACCAACCGAAGATCTCCCAAAGGAAAGAGTCACTCCACCATTCCAAGGAAGGATGAATCAGCTCCAGCGGCAAAAATTTTCCTCCTTGATCCCAGAAAATCACAGAACATTGCTATTATTTTGAAATCTCTTGCAGTCTCACAGAGCAACATTCTTGATGCCCTCATTGATGGCAAGGGACTCAATGCAGACACACTTGAAAAACTGTCTAGAGTTTCCCCCACAGAAGAAGAGCAATCTCTTATCCTTGAATACAAAGGAGACCCGGAAAGACTTGCAGCAGCTGAATCATTTCTTCATCGCATCCTCAAAGCCGTTCCTTCAGCCTTTAAGCGCTTGAATGCTATGCTATTCAGGTTGAACTATGATTATGAGATTCAAGAAATCAAGGAATCTCTGCAGACAATTGAACTGGGGTGTAAGGAAATGAAAAGCAAGGGACTTTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAACCGAATGAATGCAGGAACTGCAAGGGGAAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAGCTCTCTGATGTGAAGAGCACCAATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGTTCTGAGGGAAAACGCATTGCTCGTAACCACATTGGGAACTTGAGCCGTAGTAGTAGCAGGAGCAGCAATGATAATGAGAACTATGAGAGCAATGCTGCTTCAAATGAGCAGATAGCAAGAGAACATGTAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAATTCTCCAATGTTAAGAAAGCAGCACAAATAGATTACAGCAATTTGGTTGGTTCAATTTCAGCACTCTCAACCCGGCTAGTTGAAATTCAAGAACTTGTTTCCAAGTGTGGAAGTGGTGAAGCAGGATATTTTGTGAAAGAAATGGGTGATTTTATTGGAAATGCTAGGGAAGAACTGAAATTTGTGAGAGACAAGCAAGCAAGTGTAATGCAGCTTATCAAGAAAACAACACAATATTATCAAGGAGGAGCTTCAAAAGACACTGCAGAAGACAGTCTTCAACTGTTTGTAATAGTGAAGGATTTTCTGGGAATGGTTGATCAAACTTGCATTGAGATTGCCCGTGATATGCAGAAGAGAAAGACTCCCAAGGCAATTTCTGGGTAG 2376 0.4348 MALYMMPQSWLLLSLFFVSILTCHCQINNSPQNIETFFPNETSAPGPATQQPKPPRPSEPTQKQDQGPVATPKSTSSNGKIAKAVAATAASTIVLCGLIFFLIQRCLRSRRRKEITNTASGGDGRVVPQGNVFERIDGNVKGLIVDEDGLDVIYWRKLEGKNSNIDLHKEVASSPKNKEKEDDHHDLEENQVKKSKSIQEIPLLRGKSSTSHLNIPPGDDEPYKITRIPPPPSASTLPPTIPSLPASVGVAIKGVQKPDSPTESSTPPPPASPSTPPSTSFSAVPKMSSSTPARPPPPMPERKSPAAPPAPPPIPARMSPAPPPPPPSSKSRPASVEMPVIKQRNSSGKGMPDTSSDQVKLKPLHWDKVNTNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSHSTIPRKDESAPAAKIFLLDPRKSQNIAIILKSLAVSQSNILDALIDGKGLNADTLEKLSRVSPTEEEQSLILEYKGDPERLAAAESFLHRILKAVPSAFKRLNAMLFRLNYDYEIQEIKESLQTIELGCKEMKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTNGKTTLLHFVVEEVVRSEGKRIARNHIGNLSRSSSRSSNDNENYESNAASNEQIAREHVTLGLPIVGGISSEFSNVKKAAQIDYSNLVGSISALSTRLVEIQELVSKCGSGEAGYFVKEMGDFIGNAREELKFVRDKQASVMQLIKKTTQYYQGGASKDTAEDSLQLFVIVKDFLGMVDQTCIEIARDMQKRKTPKAISG* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0844 791 Pfam Formin Homology 2 Domain 356 769 IPR015425 -
Apr3g0844 791 MobiDBLite consensus disorder prediction 618 641 - -
Apr3g0844 791 PANTHER FORMIN-LIKE PROTEIN 5 788 - -
Apr3g0844 791 MobiDBLite consensus disorder prediction 262 276 - -
Apr3g0844 791 MobiDBLite consensus disorder prediction 617 641 - -
Apr3g0844 791 Gene3D Formin, FH2 domain 369 789 IPR042201 -
Apr3g0844 791 MobiDBLite consensus disorder prediction 36 78 - -
Apr3g0844 791 SMART it6_source 348 784 IPR015425 -
Apr3g0844 791 MobiDBLite consensus disorder prediction 62 78 - -
Apr3g0844 791 MobiDBLite consensus disorder prediction 223 239 - -
Apr3g0844 791 MobiDBLite consensus disorder prediction 168 195 - -
Apr3g0844 791 MobiDBLite consensus disorder prediction 168 338 - -
Apr3g0844 791 SUPERFAMILY Formin homology 2 domain (FH2 domain) 308 784 - -
Apr3g0844 791 MobiDBLite consensus disorder prediction 290 332 - -
Apr3g0844 791 ProSiteProfiles Formin homology-2 (FH2) domain profile. 351 791 IPR015425 -
Apr3g0844 791 PANTHER FORMIN-RELATED 5 788 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0844 Apr-Chr3 21948469 21951880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0844 5 790 FH2 protein (formin) Gene Family AT1G70140 44.183 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0844 - - gmx:100783219 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0844 3 21948469 21951880 Apr3g0844 3 21948469 21951880 ECH