Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0843 ATGGAGCTTGATGGCGTCGTTTCTCGGCCGAGGATGTTGGAAAACATTAACGGCTTTGATCTGTCACCGGATGAATCCGAAGAGGTTCACGTTCTTGCCGTCGATGACAGCCTCGTTGATCGCAAGGTCATTGAGCACCTGCTCAAAGTCTTAGCTTGTAAAGTTACTGCTGTTGACAGTGGACTAAGAGCGCTCCAATTCCTTGGACTATTGGACGAACAAAAAATGCACACTGAATCAAATGGTTTTGTTCAGCGTTTAAAGGTGGATCTAATCATCACAGACTACTGTATGCCCGGAATGACCGGTTATGAGCTGCTCAAGAAAATCAAGGAATCGTCCACGTTCAGAGAAATTCCCGTTGTGATTATGTCCTCTGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAAGAGGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTGAAACGTTTGAAGGATTACATGACAACGAAGGAGATTAGGGGTGGAAGCCAAGAAAACAGAGTGGGTGGTGGCATCAACAAAAGGAAGCTACCACAAGGAACTTCTGACGTGTCATCATCACCACCGTCCAGTCCCTCATCGACACTTTCATCTTCTCCCTCAGTGATTGATTCTCCAATCAGACGGATCAAAATGACCAGCACTGATTGA 672 0.4583 MELDGVVSRPRMLENINGFDLSPDESEEVHVLAVDDSLVDRKVIEHLLKVLACKVTAVDSGLRALQFLGLLDEQKMHTESNGFVQRLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTKEIRGGSQENRVGGGINKRKLPQGTSDVSSSPPSSPSSTLSSSPSVIDSPIRRIKMTSTD* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0843 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 9 210 - -
Apr3g0843 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 210 IPR045279 GO:0009736
Apr3g0843 223 SUPERFAMILY CheY-like 29 156 IPR011006 -
Apr3g0843 223 MobiDBLite consensus disorder prediction 167 223 - -
Apr3g0843 223 MobiDBLite consensus disorder prediction 185 223 - -
Apr3g0843 223 Gene3D - 29 189 - -
Apr3g0843 223 SMART REC_2 29 161 IPR001789 GO:0000160
Apr3g0843 223 ProSiteProfiles Response regulatory domain profile. 30 162 IPR001789 GO:0000160
Apr3g0843 223 Pfam Response regulator receiver domain 31 154 IPR001789 GO:0000160
Apr3g0843 223 CDD REC_typeA_ARR 31 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0843 Apr-Chr3 21933845 21934944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0843 1 214 Response Regulator Gene Family AT1G59940 57.798 3.72e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr3g0843 Response_reg 1.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0843 K14492 - gmx:100527828 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0843 3 21933845 21934944 Apr3g0843 3 21933845 21934944 ECH