Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0839 ATGGCTTACAATAACCCTTTCTTATTCTTATTCCTCTTTATCTCCATATCGTCCCTTCCCTTGGCACAACCCGAACTCACCACAAACTACTACCAAAAATCCTGTCCCAAATTCTCCGAAATCGTCCAAACCACCGTTTCCAAAAAGCAAAGCTCCACGCCGGCAACCGCCGCCGCCACGCTCCGCCTCTTCTTCCACGACTGCATGGTCGGCGGCTGCGACGCCTCCATCCTCGTCACCTCCAACTCCTTCAACACGGCGGAGCGCGACGCCGACGTCAACCTCTCCCTCGGCGGCGACGGCTTCAACGTTGTCATGAGCGCCAAGATCGCGCTCGAGCTCGAGTGTCCAGGCGTCGTTTCATGCGCCGACATACTCGCCACGGCGGCGCGTGACCTGGTCGTCGCCGCGGGCGGTCCCTCCTTCGAACTCCGATTAGGCCGAAAAGACGGTTTAGAATCGAAAGCCACGAGTTCAGAAAACCAATTCCCGTTAGCGAACATGGCAATGTCTCAAGTGATTTCAATTTTCGCATCGAAAGGGATTTCAATTCAAGAAATGGTGGCTCTCGTTGGGGCACACACGATAGGGTATTCGCACTGCAAAGAGTTCAGTAACAGAATCTTCAATTTTAGCGAGAATTCCGAAATTGACCCTGCGTATAACCCTGCTTATGCTTCGGGGTTGAGGAAGCTGTGTGAGAATTTTACCAAGGACCGGTCCATGTCAGCGTTTAACGACGTGATGACGCCGTTTAAGTTCGATAACGTTTATTACAAGAACTTGCAGAGAGGGATGGGGTTGTTGGGCACGGACAGTGGCATGTTTGCGGATAAGAGGACGAAGCCCTTTGTGGATATGTATGCGGCGAACCAAACACGGTTCTTTCTGGACTTCGCACGTGCCATGGAAAAGGTTAGTGTTTTGCAGGTTAAAACGGGAAGCCAAGGAGAGGTACGCCACAGGTGCGATTCCTTCAACTCGCTTAATAATTGA 996 0.5191 MAYNNPFLFLFLFISISSLPLAQPELTTNYYQKSCPKFSEIVQTTVSKKQSSTPATAAATLRLFFHDCMVGGCDASILVTSNSFNTAERDADVNLSLGGDGFNVVMSAKIALELECPGVVSCADILATAARDLVVAAGGPSFELRLGRKDGLESKATSSENQFPLANMAMSQVISIFASKGISIQEMVALVGAHTIGYSHCKEFSNRIFNFSENSEIDPAYNPAYASGLRKLCENFTKDRSMSAFNDVMTPFKFDNVYYKNLQRGMGLLGTDSGMFADKRTKPFVDMYAANQTRFFLDFARAMEKVSVLQVKTGSQGEVRHRCDSFNSLNN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0839 331 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 Gene3D - 29 327 - -
Apr3g0839 331 PANTHER PEROXIDASE 6 9 330 - -
Apr3g0839 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Apr3g0839 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Apr3g0839 331 PANTHER - 9 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 Pfam Peroxidase 43 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g0839 331 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Apr3g0839 331 Gene3D Peroxidase, domain 2 164 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0839 Apr-Chr3 21844477 21845472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0839 5 330 Peroxidase AT5G47000 56.269 2.37e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0839 K00430 - gmx:100781063 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0839 3 21844477 21845472 Apr3g0839 3 21844477 21845472 ECH
Apr3g0839 3 21844477 21845472 Apr6g0133 6 1250629 1251631 ECH