Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0830 ATGAATGAGGAAGCACCACCGGCGCTCCCCATGTCGGTGTCCTGTATCTCCGACTACGACCTCCTCTGCGGCGAGGACACCTCCGGAATCCTGTCCGGAGAGTCGCCGGAATGCTCCTCCGACCTCAATTCCTCTCCGCCTCCATCATTTCTGTCGGCAGAGGATTCCGTTGCAAGTTTCATCGAACACGAGCGCAACTTTGTCCCTGGATTCGAGTACCTCTCGAGGTTCCAATCTCACTCCCTCGACGCCAACGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTACACGCGTATTACGGCTTTCAACCTTTGACGGCGTACCTCGCCGTCAATTATATGGATCGGTTTTTGGATTCTCGCCGATTGCCGCAAACAAATGCGTGGTCTCTGCAACTTCTATCCGTTGCATGTTTGTCTTTGGCGGCAAAGATGGAGGAACCTCTGGTTCCGTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCGAGAACTATTCTTAGGATGGAGCTACTTGTTTTGGGTGTCTTGGATTGGAGGCTAAGATCGGTTACCCCACTTAGCTTCCTTGCTTTCTTCGCCTGCAAGCTAGATTCAACTGGAACATTTACTGGGTTCCTCATTTCATGGGCTACAGAAATCATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTATAGACCATCATGCATTGCTGCTGCTGCCATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTGTAGTTAAGCCTGAACATGCTGAGTCATGGTGCGAGGGACTAAGAAAAGAAAAAATTATAGGTTGCTACCAGTTGATGCAAGAACTCGTGATTAACAATAACCGCAGGAAGCTTCCTAAAGTGTTGCCACAGCTTCGAGTAACAACTCGGACCCGAATGAGGTCAAGTGTCTTATCATTCTCATCGTCCTCCTCTTCATCCTCCTTCTCAGTGTCTTGTAAGAGGAGGAAATTAAATAATTGTTTATGGGTAGATGATGACAAAGGAAACTCCAAGTGA 1038 0.4769 MNEEAPPALPMSVSCISDYDLLCGEDTSGILSGESPECSSDLNSSPPPSFLSAEDSVASFIEHERNFVPGFEYLSRFQSHSLDANAREESVAWILKVHAYYGFQPLTAYLAVNYMDRFLDSRRLPQTNAWSLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTILRMELLVLGVLDWRLRSVTPLSFLAFFACKLDSTGTFTGFLISWATEIILSNIQEASFLAYRPSCIAAAAILSAANEIPNWSVVKPEHAESWCEGLRKEKIIGCYQLMQELVINNNRRKLPKVLPQLRVTTRTRMRSSVLSFSSSSSSSSFSVSCKRRKLNNCLWVDDDKGNSK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0830 345 SMART Cyclin_C_2 189 320 IPR004367 -
Apr3g0830 345 SMART cyclin_7 92 180 IPR013763 -
Apr3g0830 345 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 15 334 - -
Apr3g0830 345 Gene3D - 59 250 - -
Apr3g0830 345 SUPERFAMILY Cyclin-like 48 186 IPR036915 -
Apr3g0830 345 SUPERFAMILY Cyclin-like 170 287 IPR036915 -
Apr3g0830 345 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
Apr3g0830 345 CDD CYCLIN 93 179 IPR013763 -
Apr3g0830 345 PANTHER CYCLINS 15 334 IPR039361 -
Apr3g0830 345 Pfam Cyclin, C-terminal domain 189 302 IPR004367 -
Apr3g0830 345 Gene3D - 70 187 - -
Apr3g0830 345 Pfam Cyclin, N-terminal domain 57 186 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0830 Apr-Chr3 21700713 21704849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0830 9 344 Core Cell Cycle Gene Families AT1G70210 64.201 4.00e-139 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0830 K18810 - gmx:100818190 567