Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0824 ATGCCATTTGGTTTGGTCTCAGCATGGAACAAGCGTAGAAGAAGCAAGTCCCAAGATCATTCAGACCCTTGTACTTTTCTACTTGCTTTTTCTTCTTTTCATGTTGTAAGGATTTATAAACCTGCTGAGTTTTGGCAACTTGATGATCAAACACCTCAACCTACCAAAAGGAGGCATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATATTCTTGGAAAAGGAGGGTTTGGCAGGGTCTACAAGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGCTGCCAGCAATTAAAGAAGCAGAGGGGGAGCGTGAATTCCGCGTAGAAGTTGATATATTGAGCAGACTTGACCATCCAAATCTTGTTTCTTTGATAGGATACTGTGCTGATGGGAAGCACAGATTCCTAGTTTATGAATATATGCATAATGGGAACCTGCAAGATCATTTGAATGGAATCGGGGAAAGAAAAATGGATTGGCCTCTGAGACTCAAAGTGGCATTGGGAGCAGCAAAAGGCCTTGCTTATCTCCATTCAAGCTCTTGTCTAGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATGTCCTTTTAGATGCCAATTTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAACTAATGCCAGAAGGACAGGAAACACGTGTGACTGCAAGAGTACTTGGTACCTTTGGCTATTTTGACCCAGAGTATACATCGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCCTTTGGTGTTGTTCTTCTAGAGCTATTGACAGGACGTCGAGCTGTAGATTTAAACCAGGGCCCAAATGATCAAAACCTAGTACTACAGATGAGGCACATACTGAATGACCGCAAAAAGCTCCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACAATTGAGTCTATTGTCATGTTCGCCAATCTGGCATCACGATGTGTACGTGCTGAGAGTAATGAGAGACCTTCAATGGTAGATTGTGTCAAAGAAATCCAAATGATTATCTATACAAATTCAAAAGGCTTGGGAGTGCTTATGCATAGCTTGAGAATGCTTTAG 1125 0.416 MPFGLVSAWNKRRRSKSQDHSDPCTFLLAFSSFHVVRIYKPAEFWQLDDQTPQPTKRRHGSSVFTLKEMEEATCSFSDDNILGKGGFGRVYKGTLRSGEVVAIKKMELPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSCLGIPIVHRDFKSTNVLLDANFEAKISDFGLAKLMPEGQETRVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQMRHILNDRKKLRKVIDPEMARNSYTIESIVMFANLASRCVRAESNERPSMVDCVKEIQMIIYTNSKGLGVLMHSLRML* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0824 374 Gene3D Transferase(Phosphotransferase) domain 1 155 364 - -
Apr3g0824 374 CDD STKc_IRAK 82 354 - -
Apr3g0824 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Apr3g0824 374 Pfam Protein kinase domain 77 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0824 374 Gene3D Phosphorylase Kinase; domain 1 45 154 - -
Apr3g0824 374 PANTHER OS01G0750732 PROTEIN 1 373 - -
Apr3g0824 374 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Apr3g0824 374 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 373 - -
Apr3g0824 374 SUPERFAMILY Protein kinase-like (PK-like) 62 359 IPR011009 -
Apr3g0824 374 ProSiteProfiles Protein kinase domain profile. 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0824 Apr-Chr3 21578131 21580964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0824 59 357 Receptor kinase-like Gene Family AT3G58690 46.382 2.03e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Apr3g0824 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0824 - - gmx:100820613 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0824 3 21578131 21580964 Apr3g0824 3 21578131 21580964 ECH