Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0812 ATGGTTTCAAGATCTTATGCTAATCTCTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAGCTCTTCCGAGGGTTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTTATGGTTGTAATGATGAGGATTCAGATGTTAGCTCTTCTGGATGTAGGGAGCGAAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATACAGAAACTGCTAAATGGTGCTTCAGTTGGGACGAGGATTCAATTTTATTACAATTAAAAGATGGTTTTTCGTCTGATATTGAGGTAATTTATGTGGGTTCCCTCAAGGCCGAAATAGATGCATGTGAGCAGGAAGAAGTTGCTCAGAGATTGCTGGATGACTTCAACTGTGTACCTACCTTTCTACCCCATGATCTCCAGAAAAGGTTTTACCTTGGCTTTTGTAAGCAGCAACTTTGGCCTCTCTTTCATTATATGCTACCCATATGCCCAGACCATGGTGACCGCTTTGATCGCTTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCTGACAAGGTCATGGAAGTAATTAATCCTGATGATGATTTTGTTTGGGTTCATGATTATCACTTGATGGTTTTGCCTACTTTCTTGAGGAAGCGGTATAATCGGGTTAAACTTGGGTTCTTTCTTCATAGTCCTTTCCCTTCTTCTGAAATTTACAGAACTTTACCAGTAAGGGATGAAATCTTGAGGGGATTGTTGAACTCTGATTTAATTGGCTTTCATACATTTGATTATGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCCAAGCGAGGACATATAGGCCTTGATTACTTTGGTCGCACTATATTTATTAAAATTTTGCCAGTAGGCATTCACATGGGTAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAACTGAAAGAGGTACAGGAAGAGTTTAAGGGTAAAAAAGTAATTCTTGGTGTCGATGACATGGATATTTTTAAGGGAATCAGTCTGAAACTTCTAGCTGTGGAGCAGCTGCTGCAGCAGAATCCAGATTTGCAGGGCAAAGTTGTATTAGTTCAAATTGTAAATCCTGCAAGGGGCTTAGGGAAGGATGTTCAAGAAGCTAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGATACATATAGTTCAAATCAATATCAGCCAGTTATTCTGATTGACCGCCCTGTTCCGCGCTTTGAGAAGAGTGCCTATTATGCTGTAGCTGAATGTTGCATTGTCAATGCTGTAAGGGACGGTATGAACTTAGTTCCATACAAATATATTGTCTGCAGGCAGGGAACTGCAAAAATGGATGAAGCATTAGGTAGAAAAAGTAATTCTTCTCATACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCGCTTAGTGGGGCAATCAGGATCAATCCCTGGGATATAGATGCTGTGGCTGATGCTCTGAATTCAGCCCTTACAATGAGTGATTCAGAGAAGCATTTGCGCCACGAGAAACATTATCGGTATGTCAGCTCTCATGATGTGGCATATTGGGCACGAAGTTTTATGCAGGATTTGGAGAGAGCTTGCAAAGATCATTACACCAAAAGGTGCTGGGGGATTGGTTTGGGCTTGGGTTTTAGAGTTGTTTCACTTTCTCATGGTTTTAGAAAGTTGTCAATTGACCATATTGTTTCAGCATACAAGAGAACCAATAGAAGGGCCATTTTTCTTGATTATGATGGTACAGTTGTACCACAATCGTCTATAATAAATAAAATCCCCAGCCCTGAAGTCATATCGGTCTTAAATGCTCTGTGTAATGATCCCAAGAATATTGTGTTTATTGTCAGTGGGAGGGGAAAAGATTCACTGAGTGATTGGTTTACTTCATGCCAAATGCTGGGACTTGCAGCTGAACATGGATACTTTTTAAGGTGGAATAGAGATTCAGAATGGGAAACCAGTCACTTGGCTGCAGACCTTGACTGGAAAAATATAGTGGAACCTGTCATGCAGTTGTACACAGAAGCAACAGATGGATCTCATATTGAAACTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTGGATCACTTGGAAAGTGTGCTTGCTAATGAACCAGCAGTTGTTAAGAGAGGCCAGCATATTGTCGAAGTTAAGCCACAGGGAATAAGCAAAGGTTTGGTGGCTGAAAAGGTTCTTTTGAGCATGGTTAATGGTGGTAATCCACCAGATTTTGTACTTTGCATTGGAGATGATAGGTCTGACGAGGACATGTTTGAGAGCATTTTGAGGACAGTTTCGTGCCCATCATTACCATCAGCTCCAGAGATCTTCGCCTGCACTGTTGGTAGGAAGCCTAGCAAGGCCAAGTATTTTCTTGATGATGCTGCTGATGTAGTAAAGTTGCTTCAGGGCCTTGCTGCTTCATCTAATCCAAAGCCCAGGCATCTTCCCCAATTCCAGGTCTCTTTTGAGAGCACAGTTTGA 2589 0.4141 MVSRSYANLLDLAGGDLLDIPHTPRALPRVMTVPGIISDLDGYGCNDEDSDVSSSGCRERKIIVANMLPLQAKRDTETAKWCFSWDEDSILLQLKDGFSSDIEVIYVGSLKAEIDACEQEEVAQRLLDDFNCVPTFLPHDLQKRFYLGFCKQQLWPLFHYMLPICPDHGDRFDRLLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLPSTSAKLKEVQEEFKGKKVILGVDDMDIFKGISLKLLAVEQLLQQNPDLQGKVVLVQIVNPARGLGKDVQEAKKETYLIAQRINDTYSSNQYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAKMDEALGRKSNSSHTSMLVVSEFIGCSPSLSGAIRINPWDIDAVADALNSALTMSDSEKHLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLSHGFRKLSIDHIVSAYKRTNRRAIFLDYDGTVVPQSSIINKIPSPEVISVLNALCNDPKNIVFIVSGRGKDSLSDWFTSCQMLGLAAEHGYFLRWNRDSEWETSHLAADLDWKNIVEPVMQLYTEATDGSHIETKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGISKGLVAEKVLLSMVNGGNPPDFVLCIGDDRSDEDMFESILRTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDAADVVKLLQGLAASSNPKPRHLPQFQVSFESTV* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0812 862 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 795 IPR006379 -
Apr3g0812 862 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Apr3g0812 862 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Apr3g0812 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Apr3g0812 862 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 849 - -
Apr3g0812 862 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Apr3g0812 862 CDD HAD_TPP 593 835 - -
Apr3g0812 862 Gene3D - 591 710 IPR023214 -
Apr3g0812 862 Gene3D - 722 851 IPR023214 -
Apr3g0812 862 TIGRFAM T6PP: trehalose-phosphatase 590 840 IPR003337 GO:0003824|GO:0005992
Apr3g0812 862 Gene3D Glycogen Phosphorylase B; 54 312 - -
Apr3g0812 862 SUPERFAMILY HAD-like 592 841 IPR036412 -
Apr3g0812 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 849 IPR001830 GO:0003824|GO:0005992
Apr3g0812 862 Gene3D Glycogen Phosphorylase B; 313 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0812 Apr-Chr3 21279640 21285003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0812 1 862 Trehalose Biosynthesis Gene Families AT1G23870 75.806 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0812 K16055 - gmx:100775779 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0812 3 21279640 21285003 Apr3g0812 3 21279640 21285003 ECH