Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0805 ATGGCGGCTTCAATGAGAATATCAAGACTCATACACCGCTCCTTCTCTTCTGCCTCCTTTTCTAGAGGTGGGAATGGTTACCTGGGTGCAGGACTGTGTAAATACAGCACTGCTACTGCCATCGAAGAACCCATTAAACCGGCAGTACAAGTAGAACACACCCAACTCTTGATTGATGGAAAATTCGTAGATGCTGCTTCTGGTAAAACTTTTCCAACGTTGGATCCAAGGACAGGGGAAGTTATTGCTCATGTTGCTGAGGGTCACTCTGAAGATATTGATCGAGCAGTTGCAGCTGCACGCAAAGCATTTGATCAAGGACCATGGCCTAAGATGACAGCCTATGAAAGGCAAAAGATCTTGTTGCGTGCTGCTGATCTGCTTGAAAAGCATAATGATGAGATTGCAGCACTTGAGACTTGGGATAATGGAAAGCCTTATGAGCAATCTGCTCAGATTGAAATTCCAATGCTGGTTCGCCTAATTCGATACTATGCTGGATGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCATATCATGTGCAAACATTGCACGAACCGATTGGTGTTGCGGGTCAGATCATTCCTTGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCTGCATTGGCCTGTGGCAATACCATTGTTCTCAAAACTGCTGAGCAGACACCATTGTCTGCTTTATATGCATCAAAACTATTTCACGAGGCTGGACTTCCTCCTGGTGTTTTAAACATAGTATCAGGGTTTGGTCCTAGTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTTGATAAGCTTGCTTTTACTGGTTCAACTGATACTGGAAAGATAGTCCTTGAACTGGCGGCTAGAAGCAATTTGAAGCCTGTAACTTTGGAACTTGGTGGAAAATCCCCCTTTATAGTGTGTGAAGATGCTGATGTAGATCAAGCTGTAGAGCTAGCTCATTTTGCTTTGTTCTTCAATCAGGGACAATGTTGCTGTGCTGGGTCCAGAACATTTGTGCATGAACGTGTATACGATGAGTTTGTTGAGAAAGCGAAAGCTCGTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGAGTGGAATAGAGCAAGGTCCTCAGATTGATTCAGAGCAATTTCAGAAAATACTGAAGTATATTAGATCTGGTGTTGAAAGTGGGGCTACCCTTGAAACTGGAGGAGATAGGCTTGGCCAAAAGGGCTTCTACATTCAACCCACTGTCTTCTCAAATGTCCAGGATGGGATGGTGATTGCAAAGGATGAGATCTTTGGTCCAGTTCAATCCATATTAAAATTCAAGGACCTTGGTGAGGTAGTTCAAAGAGCAAATAAAACACGTTATGGGCTTGCAGCAGGCGTGTTCACAAAGAACATAGACACTGCGAATTCTTTGACACGAGCACTGAGAGCTGGAACAGTATGGATAAATTGCTTTGACACGTTTGATGCTGCAATTCCTTTTGGTGGGTACAAAATGAGTGGGCAAGGCAGAGAAAAAGGAGAGTACAGTCTTAAGAACTACTTGCAAGTTAAGGCTGTTGTTGCTCCTTTGAAGAACCCAGCATGGCTTTGA 1605 0.4417 MAASMRISRLIHRSFSSASFSRGGNGYLGAGLCKYSTATAIEEPIKPAVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDIDRAVAAARKAFDQGPWPKMTAYERQKILLRAADLLEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYASKLFHEAGLPPGVLNIVSGFGPSAGAALASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKSGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRLGQKGFYIQPTVFSNVQDGMVIAKDEIFGPVQSILKFKDLGEVVQRANKTRYGLAAGVFTKNIDTANSLTRALRAGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVAPLKNPAWL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0805 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Apr3g0805 534 CDD ALDH_F2BC 51 525 - -
Apr3g0805 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Apr3g0805 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
Apr3g0805 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 522 IPR016162 GO:0016491
Apr3g0805 534 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 534 - -
Apr3g0805 534 Pfam Aldehyde dehydrogenase family 62 524 IPR015590 GO:0016491
Apr3g0805 534 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 23 534 - -
Apr3g0805 534 SUPERFAMILY ALDH-like 49 527 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0805 Apr-Chr3 21124654 21128386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0805 3 534 Aldehyde Dehydrogenase Gene Family AT3G48000 77.840 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0805 K00128 - gmx:100777399 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0805 3 21124654 21128386 Apr3g0805 3 21124654 21128386 ECH
Apr3g0805 3 21124654 21128386 Apr1g0832 1 10833630 10838648 ECH