Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0796 ATGCATAGTGGTAATCATTTCAAAGCGGATTCAAAGGGTTCTTCATCTGGTTCATCTTCCGCTGATAATTCAGAAAAATTAATTGGCTATACCCTCGTCGGGGTTTTTGCTGTTTCCTTAGTGGCTATAGCAGTAGTTTTTGTTTTCAGTTTTAAGAGGAAAAAGTCAAAAGGGGATGCCTATGGTGCACCCTATTTGCCACCTAATTTTTATGTTTCAGGTGCTGATTGGCGTCACTATGAACAACAGCCTTTCCCACAATTTTCCCCTGCAAACAATTATGGAAATGCAAATGTAAGCACGAAGCATGTAGGAGCTCCTTTAGACTCAGTACAGCCGAAGAGTGCTCAGATAGTTTTTACTTATGACAAGGTTATGGAAATAACCAATGCATTTTCTAGTCAAAATGTGATAGGGGAAGGAGGGTTTGGGTGTGTTTACAAAGGTTTGTTGCCAGATGGAAAAGCAGTTGCAGTAAAGCAGCTTAAGGCTGGTAGTGGGCAGGGAGATAGGGAATTCACGGCTGAAGTTGAGATTATTAGCCGAGTTCATCATCGACATTTGGTATCATTAGTTGGTTATTGCATAACTGAGCAGCAGAGAGTTCTCATCTATGAGTATGTTCCTAATAGAACACTCCATCATCACTTGCATGGTAACGTGAGAAGTGGAATGCCGACGTTAGACTGGCCCAAGAGGCTAAAGATAGCGATTGGTGCTGCAAAAGGTCTAGCATATCTGCATGAGGATTGCAGCCAAAAGATTATTCATAGAGATATTAAGTCCGCTAACATACTTTTGGATGCTGCTTATGAGGCAAAGGTTGCAGACTTTGGACTTGCAAGGCGAGCTGATGCAGCTAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTGTAACAGGAAGGAAACCCGTTGATCCAACTCAGCCTTTGGGAGACGAGAGTTTGGTTGAGTGGGCACGTCCACTTCTCCTTCGTGCAATTGAGACACGTGATTTTAGTGCACTGACAGACCCAAGACTCGAAAAACACTTTGTGGAGAGTGAAATGTTCAGAATGATTGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCCAAAAGGCCTCGAATGGGTCAGGTGGTAAGAGCCTTAGATAGTGGAGACGAAATACCTGATCTATCTAATGGGGTGAAATATGGTCAAAGCACGGTTTATGATTCTGGCCAATATGATAAAGACATTGGGCTATTCAGGAGGATGGCCAATGGCAGCGTTGTTGATTCTGAGTTTGATATGTATAGTAGAGAAAGCAGTTTTTCAAGAGATATATCAAGAGGTTCCCAACATGCAGGGATTTCAAGTAGTTCTAGTAACGAATCAGAATCTATAGCTTTCAACAGGTGTAGGAACAGCACTGGATGA 1494 0.429 MHSGNHFKADSKGSSSGSSSADNSEKLIGYTLVGVFAVSLVAIAVVFVFSFKRKKSKGDAYGAPYLPPNFYVSGADWRHYEQQPFPQFSPANNYGNANVSTKHVGAPLDSVQPKSAQIVFTYDKVMEITNAFSSQNVIGEGGFGCVYKGLLPDGKAVAVKQLKAGSGQGDREFTAEVEIISRVHHRHLVSLVGYCITEQQRVLIYEYVPNRTLHHHLHGNVRSGMPTLDWPKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDAAYEAKVADFGLARRADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPTQPLGDESLVEWARPLLLRAIETRDFSALTDPRLEKHFVESEMFRMIEAAAACVRHSAPKRPRMGQVVRALDSGDEIPDLSNGVKYGQSTVYDSGQYDKDIGLFRRMANGSVVDSEFDMYSRESSFSRDISRGSQHAGISSSSSNESESIAFNRCRNSTG* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0796 497 CDD STKc_IRAK 138 409 - -
Apr3g0796 497 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Apr3g0796 497 MobiDBLite consensus disorder prediction 1 22 - -
Apr3g0796 497 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 10 479 - -
Apr3g0796 497 Pfam Protein tyrosine and serine/threonine kinase 135 407 IPR001245 GO:0004672|GO:0006468
Apr3g0796 497 Gene3D Transferase(Phosphotransferase) domain 1 208 419 - -
Apr3g0796 497 Gene3D Phosphorylase Kinase; domain 1 95 207 - -
Apr3g0796 497 SMART serkin_6 132 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0796 497 MobiDBLite consensus disorder prediction 8 22 - -
Apr3g0796 497 MobiDBLite consensus disorder prediction 465 497 - -
Apr3g0796 497 ProSiteProfiles Protein kinase domain profile. 132 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0796 497 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 10 479 - -
Apr3g0796 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Apr3g0796 497 SUPERFAMILY Protein kinase-like (PK-like) 112 408 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0796 Apr-Chr3 20827474 20831829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0796 27 485 Trihelix Transcription Factor Family AT1G70460 60.842 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr3g0796 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0796 - - gmx:100797563 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0796 3 20827474 20831829 Apr3g0796 3 20827474 20831829 ECH