Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0772 ATGGAAATGGAAAAAGAAGATATCTTGAATAATCAAAGTCATAGTTCATTTAATGAGCAAGAGTTCTTAAGAGAGATCCTTCAATACCCAGAAAATTTCTCACCTGAAAGGGAGCAATATCCCTCCCCTTGTTACACAATCCAAAACAATAACACTAGTGTTGAAGGTGGTGCCACAAGCCCCACCAATAGCTCTTTGTCCTTTGATGAGACAAGCCTTTGTGGGAATGATGGCACCCTCCACAAAAGTAACAGCTCCAACTCTATCAAGTCTTTTGAGAGAGGTGTTTGTTCTCCATTTACTTACCTTCTTTCTTTTGATAACTCAACTGCTGAACCAATTATCCATGGTTCACCTAAGCTTAATTCAGCATTTGGATCTAATAAAAGGGCTATAGTGAAAGATGGATCTGAATTAGAATCAAGGATGAGTCAAACAAGAAAGAAAGTTAGAGGGTCATCTGAGACACATGATCACATAATTGCTGAGAGGAAAAGAAGACAGGAACTCACAGGGAGCATCATAGCACTTTCAGCAACAATTCCTGGGCTCAAGAAGATGGACAAGGCTTATGTACTTCGAGAAGCTGTCAATTACACGAAACAACTTCAAGAGCGAATTAAAGAGTTGGAGAATCAAATCAAAGATAAAAGAGGAGATTCAACAATATTCATCAAGAAATCGCGAGCCTCTTCAGATAAAAACATTGGCAAATGTGAAAAGAACACAGAATCACCATTTGAGGTTGAAGCAAGAGTCCTGGAGAAGGAAGTACTCATTGGAATCCATTGTGAAAAGCAAAAGGACATAGTGTTCAAAATACATGTCTTGCTTGAAAAGCTTCATCTCTCTATAACTAGTAGCAGCGTGTTACCATTCGGAACTTCTACTCTTATAATCAACATTATTGCTCAGATGGGTGATGAATATAGCATGACAATGGATGACCTCGTGAAAAATATGAGAGAATATCTGTTAGAGCATATGTCATGCAATAGTGATCCGTGCTAG 1011 0.3848 MEMEKEDILNNQSHSSFNEQEFLREILQYPENFSPEREQYPSPCYTIQNNNTSVEGGATSPTNSSLSFDETSLCGNDGTLHKSNSSNSIKSFERGVCSPFTYLLSFDNSTAEPIIHGSPKLNSAFGSNKRAIVKDGSELESRMSQTRKKVRGSSETHDHIIAERKRRQELTGSIIALSATIPGLKKMDKAYVLREAVNYTKQLQERIKELENQIKDKRGDSTIFIKKSRASSDKNIGKCEKNTESPFEVEARVLEKEVLIGIHCEKQKDIVFKIHVLLEKLHLSITSSSVLPFGTSTLIINIIAQMGDEYSMTMDDLVKNMREYLLEHMSCNSDPC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0772 336 Gene3D - 142 219 IPR036638 GO:0046983
Apr3g0772 336 PANTHER BHLH TRANSCRIPTION FACTOR 10 330 - -
Apr3g0772 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 217 IPR036638 GO:0046983
Apr3g0772 336 Pfam Helix-loop-helix DNA-binding domain 159 204 IPR011598 GO:0046983
Apr3g0772 336 Coils Coil 193 220 - -
Apr3g0772 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Apr3g0772 336 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 10 330 - -
Apr3g0772 336 SMART finulus 160 209 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0772 Apr-Chr3 20386995 20389634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0772 103 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.979 5.38e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr3g0772 HLH 2.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0772 - - aprc:113863851 576.63