Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0768 ATGAAGAAAATAGTCCATCTTGTCTATTTTCAGTGCCTTGTTTTTCTTCTCACGAAGCATCTATTCCTATCAAAAACAGTAATGGCAGAACCAAGGGCCAAGACTGTCAAAATAACATGCAACCATAAGCTAGAGCACAACACCACAATCTTTGTTCCAAATTTTGTTGCAACTATGGAGAAGATCAGTGAACAAATGCGCAACACTGGTTATGGCACAGCAGTTGTAGGCGCAGGAGGACCTGACACTAACTACGGGATGGCACAGTGCTATGGAGATCTTTCATTACTTGACTGTGTGTTATGTTATGCTGAGGCACGCACAGTTCTTCCACAGTGCTTCCCTTATAATGGTGGTCGCATATACCTTGATGGTTGCTTCATGAGGGCTGAAAACTATAGTTTCTATAATGAGTATATTGGACCAGGGGACAAGTCTGTTTGTGGAAACTCAACAAAGAAGAACACAAGTTTTCAAGCAGCAGCAAAGAAGGCTGTTTTGAGTGCAACTCAAGCTGCACCAAACAACAAAGGTTATGCTAGGGAGAAGGTGGTTGTGTCAGGAACAACAAATGATTCAGCTTATGTTTTGGCTAATTGTTGGAGGAGTTTGGACACAAGGTCTTGTAAAGCTTGTCTTGAGAATGCATCTTCTTCCTTATTGGGGTGCTTGCCCTGGTCAGAAGGGAGAGCACTGAACACTGGATGCTTCATGAGGTACTCGGACACAGATTTTCTCAACAAGGAACAGGAAAATGAAAGTTCAAGAGGTAATGTAGTAGTGATAGTGATTGCAGTAGTTAGTGCAGTGGTTGTTTTGGTGGTTGGAATAGCTATTGTGGTTTATATCCGCAAACTCAAATACATTCAAAGGAAACGAAGAGGTTCAAATGATGTTGAGAAATTAGCTAAGAGCCTTCACCACAATAGCTTGAACTTCAAGTACTCTACACTGGTGAAATCTACTGAATCTTTTGCTGAAGTTAACAAGCTTGGGCAAGGAGGATTTGGAACTGTTTATAAAGGAGTTCTGGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAAACATAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTAGTGTGGAACACAAGAATCTAGTAAGACTCTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTACTTGTATATGAATTTCTACCTAACAGAAGTCTTGATCGCTTCATATTTGATAAAAGAAAAGCTAGGGAACTAAACTGGGACAGGCGATACGACATTATCACTGGGACAGCTGAAGGACTGGTTTACCTTCATGACAACTCCAAAATTAGGATAATTCACAGAGATATCAAAGCCAGCAACATCTTGTTGGATGCAAAGCTTCGTGCCAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAAGATAAGAGCCACATTAGTACAGCTATTGCTGGAACTCTGGGTTATATGGCTCCAGAGTACCTAGCACATGGTCAGTTAACAGAGAAGGCTGATGTATATAGTTTTGGAGTGTTGCTGCTAGAAATAGTTACTGGGAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGATAGCCTAATTATAATGACATGGAAGCATTTTAACTCAGGAACTGCAGAACAACTAATTGATCCACATCTAGTGTTGGAGGATCACAGAAGCAATGTTAAGAATGAGATTTTAAGAGTGGTGCACATAGGACTCTTATGCACCCAAGAAATCCCTTCCTTACGACCAACTATGTCAAAGGCACTACAAATGCTAACAAAGAAAGAGGAGAACCTGGCAGCACCCTCTAATCCACCTTTCATTGATGAAAGTACCATGGAACTCTTCCATGATATAAAGGATGACCAATTTTACCCTCTCAATGCAGCAGACTCATTGGCTACTATGTCTCATAGCTCATTTTACCCTAGGTAA 1956 0.4085 MKKIVHLVYFQCLVFLLTKHLFLSKTVMAEPRAKTVKITCNHKLEHNTTIFVPNFVATMEKISEQMRNTGYGTAVVGAGGPDTNYGMAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFYNEYIGPGDKSVCGNSTKKNTSFQAAAKKAVLSATQAAPNNKGYAREKVVVSGTTNDSAYVLANCWRSLDTRSCKACLENASSSLLGCLPWSEGRALNTGCFMRYSDTDFLNKEQENESSRGNVVVIVIAVVSAVVVLVVGIAIVVYIRKLKYIQRKRRGSNDVEKLAKSLHHNSLNFKYSTLVKSTESFAEVNKLGQGGFGTVYKGVLADGREIAIKRLYFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNRSLDRFIFDKRKARELNWDRRYDIITGTAEGLVYLHDNSKIRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASEYSDSLIIMTWKHFNSGTAEQLIDPHLVLEDHRSNVKNEILRVVHIGLLCTQEIPSLRPTMSKALQMLTKKEENLAAPSNPPFIDESTMELFHDIKDDQFYPLNAADSLATMSHSSFYPR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0768 651 SMART serkin_6 325 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0768 651 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Apr3g0768 651 CDD STKc_IRAK 331 601 - -
Apr3g0768 651 Gene3D - 145 245 IPR038408 -
Apr3g0768 651 Gene3D - 32 135 IPR038408 -
Apr3g0768 651 Gene3D Transferase(Phosphotransferase) domain 1 401 609 - -
Apr3g0768 651 ProSiteProfiles Gnk2-homologous domain profile. 33 135 IPR002902 -
Apr3g0768 651 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Apr3g0768 651 Pfam Salt stress response/antifungal 48 133 IPR002902 -
Apr3g0768 651 Pfam Salt stress response/antifungal 148 242 IPR002902 -
Apr3g0768 651 SUPERFAMILY Protein kinase-like (PK-like) 308 626 IPR011009 -
Apr3g0768 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Apr3g0768 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 632 - -
Apr3g0768 651 ProSiteProfiles Protein kinase domain profile. 325 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0768 651 Pfam Protein kinase domain 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0768 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 10 632 - -
Apr3g0768 651 Gene3D Phosphorylase Kinase; domain 1 286 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0768 Apr-Chr3 20250590 20253679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0768 2 651 Receptor kinase-like Gene Family AT1G70520 65.954 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr3g0768 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0768 - - ccaj:109816764 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0768 3 20250590 20253679 Apr3g0768 3 20250590 20253679 ECH
Apr3g0768 3 20250590 20253679 Apr4g1772 4 24010790 24013973 ECH
Apr3g0768 3 20250590 20253679 Apr6g0044 6 415697 418571 ECH