Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0766 ATGGAAGGGACAAGCATGGATCTTGAACTCCCTTCAGCTGTCAATGAATCAGAACAACAAAAGTTCACTCTACCTGTGGATTCTGAACACAAGGCCACAGAATTCAGACTATTTTCCATAGCCAAACCCCACATGCGTGCATTCCATCTATCATGGGTCTCTTTCTTCTCATGCTTTGTGTCAAGCTTTGCTGCACCACCCCTTCTTCCCATAATTCGTGACAACCTTAACCTCACAGCCACTGACATAGGAAATGCTGGGGTGGCATCAGTTTCAGGTGCTGTTTTTGCAAGAATTGCCATGGGAACAGCTTGTGACTTGGTTGGACCCCGCCTTGCGTCTGCATCGCTCATTCTGCTCACAGTGCCATTTGTGTACTTCACTTCCATTATCAACTCAGCCACCTCTTTCCTCCTTGTCCGTTTCTTTACTGGCTTTTCCTTAGCCACCTTTGTCTCCACACAGTTCTGGATGAGTTCAATGTTTTCTGCTCCTGTGGTTGGTTCAGCCAATGGTTTTGCTGGTGGATGGGGCAACCTTGGAGGAGGAGCTACCCAACTCATCATGCCTCTTGTGTTTTCACTCATCCGCGACATTGGTGCTACACAGTTCACAGCATGGAGAATTGCATTCTTTGTTCCTGCTTTTTTTCAAATGATGACAGCATTTTCCCTTTTGATATTTGGCCAAGACATGCCAGATGGGAACTTCCACCGCTTGAAGAAGTCAGGGGATAAAGCAAAAGATGAATTTTCAAGCGTGGTGTTTCATGGGGTCACAAATTATAGAGGGTGGATTCTGGCGTTGACTTATGGATATTGCTTTGGGGTAGAGTTGACCATAGACAACATCATAGCTGAATACTTCTATGATAGGTTTAATCTTAAACTCCACACTGCTGGAATCATTGCGGCAAGCTTTGGCTTGGCTAACTTGTTTTCTAGACCTGGTGGGGGTTATTTATCTGATGTAATGGGAAAGAGGTTCGGTATGAGGGGTAGATTATGGGTCTTGTGGCTGTGCCAAACCTTGGCTGGTGTGTTCTGCATAATCCTTGGCCTTGTGGGATCTTTAAGTGTATCCATTGTTGTTATGATCATATTCTCCGTGTTTGTCCAAGCTGCTTGTGGGATGACCTTTGGAATTGTTCCATTTGTCTCAAGAAGGTCATTAGGGGTCATCTCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTAGTGACCCAGCTCATTTTCTTCAAAGGATCTAAGTTTTCAAAAGAAAGGGGAATAACTCTAATGGGTGTCATGATCATACTATGCACCCTGCCAATATGCTTACTCTACTTTCCACAGTGGGGTGGAATGTTTTTTGGTCCCTCATCTAAAAGGGTCACAGAAGAAGATTACTACTTGGCTGAGTGGAACTCAAAGGAGCAAGAGAAAGGCTCTCATCATGCAAGCTTGAAATTTGCTGATAATAGCAGAAGTGAAAGAGGCAGAAAACTGAACACTTCAACTAGGCCTACTGAGGAAATCACACCCCCACATGTTTGA 1539 0.4483 MEGTSMDLELPSAVNESEQQKFTLPVDSEHKATEFRLFSIAKPHMRAFHLSWVSFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTVPFVYFTSIINSATSFLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFAGGWGNLGGGATQLIMPLVFSLIRDIGATQFTAWRIAFFVPAFFQMMTAFSLLIFGQDMPDGNFHRLKKSGDKAKDEFSSVVFHGVTNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGYLSDVMGKRFGMRGRLWVLWLCQTLAGVFCIILGLVGSLSVSIVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGVMIILCTLPICLLYFPQWGGMFFGPSSKRVTEEDYYLAEWNSKEQEKGSHHASLKFADNSRSERGRKLNTSTRPTEEITPPHV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0766 512 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 498 IPR044772 GO:0015112
Apr3g0766 512 MobiDBLite consensus disorder prediction 472 500 - -
Apr3g0766 512 Gene3D MFS general substrate transporter like domains 246 448 IPR036259 -
Apr3g0766 512 SUPERFAMILY MFS general substrate transporter 37 444 IPR036259 -
Apr3g0766 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 47 447 IPR020846 GO:0022857
Apr3g0766 512 Gene3D MFS general substrate transporter like domains 39 237 IPR036259 -
Apr3g0766 512 CDD MFS_NRT2_like 48 441 IPR044772 GO:0015112
Apr3g0766 512 Pfam Major Facilitator Superfamily 53 408 IPR011701 GO:0022857|GO:0055085
Apr3g0766 512 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 11 498 - -
Apr3g0766 512 MobiDBLite consensus disorder prediction 472 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0766 Apr-Chr3 20195087 20197367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0766 20 503 Inorganic Solute Cotransporters AT1G12940 73.967 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0766 K02575 - gmx:100787888 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0766 3 20195087 20197367 Apr3g0766 3 20195087 20197367 ECH