Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0745 ATGGTGGGTCCCTCCCAAGCGGACAAATCCACCCTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCCCGTTATCCAGACGGCAAGCTCCGTTACCTCGGCGGCCACACCCGCGTCCTCGCCCTCCCTCGCTCCACTCCCTTTTCCGGGCTTATGGTGAAATTGGGAGAACTATGTGGCTCACACGTCACCCACCTCCGTTGCCAGTTACCCACCGAAGACCTCGACGATTTGGTTTCCATCACCTCTGACGAAGACCTCACTAACCTCATAGACGAATACGACCACGTTTCGTCTTTAAAAATCAGAGCCTTCCTTTTCTCTTTGCCCACTCTGTCAAAAACGTCGTCGTCTTCCACGCTGTCGTTTTTCTGGCCTACGGTTACGGCTCTGCGCCCGGTTGTGGTACGTCAGATGTCACCGGCTACCGCTATGAAGAAGTCGAATGTTCCTTTAGCCTACTCTGGTTATCCCCGCATTCAGGGGAATCGGGGTGTCTCATCTTCCTCCATGTCAAGTACCACAAAGTCAACTCCTCGATTGAAGCACGGTCTTGCTCATAGTGATGCATGGTCGTTCTTTTATTACTGTCATGGGCGTCCTTGTATAAGCACGGTCATGCTTCTATTGTAG 636 0.5267 MVGPSQADKSTLKFLCSYGGKILPRYPDGKLRYLGGHTRVLALPRSTPFSGLMVKLGELCGSHVTHLRCQLPTEDLDDLVSITSDEDLTNLIDEYDHVSSLKIRAFLFSLPTLSKTSSSSTLSFFWPTVTALRPVVVRQMSPATAMKKSNVPLAYSGYPRIQGNRGVSSSSMSSTTKSTPRLKHGLAHSDAWSFFYYCHGRPCISTVMLLL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0745 211 Pfam PB1 domain 28 108 IPR000270 GO:0005515
Apr3g0745 211 SMART PB1_new 26 108 IPR000270 GO:0005515
Apr3g0745 211 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 5 147 - -
Apr3g0745 211 PANTHER OS05G0427100 PROTEIN-RELATED 5 147 - -
Apr3g0745 211 CDD PB1_UP2 15 108 - -
Apr3g0745 211 SUPERFAMILY CAD & PB1 domains 28 116 - -
Apr3g0745 211 Gene3D - 30 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0745 Apr-Chr3 19606498 19613999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0745 5 109 MAP Kinase Kinase Kinase AT2G35050 47.748 5.82e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0745 - - aprc:113859578 398.667